Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g1097 ATGTTTACCTGGAGCCTGAGTTTGCAGTTTTCAGCTTTGGACTTTTGCGCGAACAGCAACGTCTTATCTGAAGTATTCAGGCCTGTCTCGCTGTCGCAAAAGCTGCCGGTGCGATGGGCGAATCACCTGAGACCAAATCTAAAGAAAGGTGCATTTATTGCGGAAGAAGAGCAGCTAATTGCTGACCTGCATGCTAAGATGGGAAACAAATGGGCACTCACCGCTGCAAATTTACCTGGTCCGACAGATAATGAGATCAAGAACTACTGGAATACCGCGATCAAGAGGCGAGAACGATCTGGCTTGCCACTTTATCCCCTTGAAGTGTGTTTGCAATCAATGCAAGAGAGGCAGCAAGGCCAACACAGTGTTGGAATTAATGGTATTGAAAGAGGAAATCATTACTTAATGGCAAAAAAAGATGATGAGGTACAAAATGCCACACTCAATAGCCTGAATGCTGGTCATGAGTTCTTACCTTCTGTGCCCAAGCTGCCTGATACATCTCCTAATAGCAGTCTGCTGGAAGGTTATCGCTCATCTCCAAATTGTAATATTTTGCCATCAATGCTACCTCACCCTGACCATTCAAAATTGAACGTGTACAGTAAAGAATGGGATGACTACGTTGACCCTGTTTCTCCATTAGGTACAACATCAATCGAAAATGAATGCGCTGCTATTTGTGCTTATAAATCCTTCTTGGATGAACTAGCGCTTGCACAGGCCTCAAGGGGATTGGACCCATCCATGTCCGATATTGCTGAGCCAGATGGCTTCCTCGCTTCATACTCGTTTGACCATGGTTCTGATGCTGTAACAACCGAGTAA 831 0.4501 MFTWSLSLQFSALDFCANSNVLSEVFRPVSLSQKLPVRWANHLRPNLKKGAFIAEEEQLIADLHAKMGNKWALTAANLPGPTDNEIKNYWNTAIKRRERSGLPLYPLEVCLQSMQERQQGQHSVGINGIERGNHYLMAKKDDEVQNATLNSLNAGHEFLPSVPKLPDTSPNSSLLEGYRSSPNCNILPSMLPHPDHSKLNVYSKEWDDYVDPVSPLGTTSIENECAAICAYKSFLDELALAQASRGLDPSMSDIAEPDGFLASYSFDHGSDAVTTE 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g1097 276 Gene3D - 51 97 - -
Lele32g1097 276 Pfam Myb-like DNA-binding domain 49 92 IPR001005 -
Lele32g1097 276 SMART sant 48 96 IPR001005 -
Lele32g1097 276 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 38 188 - -
Lele32g1097 276 CDD SANT 54 92 IPR001005 -
Lele32g1097 276 ProSiteProfiles Myb-like domain profile. 44 94 IPR001005 -
Lele32g1097 276 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 44 98 IPR017930 -
Lele32g1097 276 SUPERFAMILY Homeodomain-like 37 97 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g1097 Lele-ChrLele32 10050149 10053141 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g1097 37 194 MYB Transcription Factor Family AT3G11440 48.101 3.54e-40 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele32g1097 Myb_DNA-binding 3.6e-09 CL0123