Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g1079 ATGATTGAATTTTGCTTCTTGGCAGTTTGTGCTGACTTGGTTCGAGGTGCCAAGGACAAGATGCTCAGGGTCAAGGGACCTGTGAGAATGCCCACTAAAGTTCTTCATATCACCACTAGGAAATCCCCTTGTGGTGAAGCTATCGTAACCTCAACTGCCATGGCCACGAGTCTTCTCATTAATTTGTTTCTGCAGGAAGAATCCATGTCAGCATCTGGTGTTCCACTAGTGGTTTATGAAAAGGGTGTTAATCTAGTGTACATCACTTCAATATTTTTGAAACACTTGATTGAAAATGGCCAAGGTGATCTGGAGTTGCATATGTTGCTAGATGAAAATGAATCAATACTAGAGGATATTTTGGGAGACTTCTATTTCCGTTACGATGTAAGCAGAAGTAATGGAGGAACAACTGAAATTCATGATGAGTTAAGAGATATGAAGAAGAAGAATGAAGGGAAGATGGTAGATCTGATCTAG 480 0.4042 MIEFCFLAVCADLVRGAKDKMLRVKGPVRMPTKVLHITTRKSPCGEAIVTSTAMATSLLINLFLQEESMSASGVPLVVYEKGVNLVYITSIFLKHLIENGQGDLELHMLLDENESILEDILGDFYFRYDVSRSNGGTTEIHDELRDMKKKNEGKMVDLI 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g1079 159 Pfam Ribosomal protein S10p/S20e 9 46 IPR027486 -
Lele32g1079 159 SUPERFAMILY Ribosomal protein S10 9 46 IPR036838 -
Lele32g1079 159 Gene3D Ribosomal protein S10 domain 6 52 IPR036838 -
Lele32g1079 159 PANTHER 30S RIBOSOMAL PROTEIN S10 FAMILY MEMBER 8 46 IPR001848 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g1079 Lele-ChrLele32 9131573 9132834 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g1079 9 50 Cytoplasmic Ribosomal Protein Gene Family AT3G47370 83.333 4.90e-19 76.3