Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g1073 ATGGCGGATTTAGTAAGTTGTGGAAGCTTCCTTGAGAACTCAAAACACTACATTGCCATGATTTCTTTGCAGTTTGGATATGCAGGCATGAATATTATCACTAAGGTTTCCCTCAACCATGGGATGAGCCATTATGTCCTCGTGGTTTATCGGCACGCCTTCGCAACTGCTTCCATTGCTCCGTTCGCTTTCCTGTTTGAAAGGAAAGGTCAACCAAAGATAACATTCCGAGTATTCATGCAAATTTTCATCCTTGCTCTTCTTGGACCTGTGATTGATCAAAATTTCTACTACGCCGGGTTGAAATTCACTTCCCCAACCTTCTCTTGTGCAATGAGCAACATGGTTCCGGCCATGACTTTTGTGATGGTTGATGGAGAAGATCAACATGAAGAAGGTGAGGTGTTAAGCAAAGGTGGTGGGAACCATAGTGACAGTGGCTGGTGCCATGTTAATGACACTGTACAAAGGTCCTATTTTGGAGATGGTGTGGTCCAAACACGCCCACTTTCACACCACAACCAATATTCAAACTACAGAACACACTTCAACTTCTTCCTCAGACAAACAATTGCAAAAGCATTGGAGACATACACGAATCATCAATTGAGTTTGACATCACTAGTGTGCTTCGTAGGAACCCTTCAGGCAATTGTTGTTACTTGTGTGGTGGAAAACAATCCTTCGGCGTGGAAGATTGGCTTCGACATGAACTTGCTTGCTGCTGCCTATGCCGGAATTGTGACGTCAAGCTTATCATACTACGTGCAAGGACTGGTGATCAAGAAGAAAGGTCCTGTCTTTGCTACTGCCTTTAGCCCTTTGATGATGATTATTGTGGCTGTCATGAGCTCCTTCATCCTTGCTGAACAAATTTATGTTGGAGGTGTGATTGGGAGCATCTTAATAGTCATTAGATTGTACTCTGTCTTATGGGGAAAGCATAAAGAAAGAGTGGAACGCAAAGTGGCTGAAGCAAAAGAAATAGCCTTACCAATGAAGGCTTCTCAAGTTGATGAAAATAATAATAATAATTATTCATCTGATGGAAAACAATTAATTAATAATGAATCAAAATTAGAGGAATCCTTCAACAACAATAATTCAGTTCTCATTAGCATGCCTCACAGTACCAACCAGGAGCCATAA 1149 0.416 MADLVSCGSFLENSKHYIAMISLQFGYAGMNIITKVSLNHGMSHYVLVVYRHAFATASIAPFAFLFERKGQPKITFRVFMQIFILALLGPVIDQNFYYAGLKFTSPTFSCAMSNMVPAMTFVMVDGEDQHEEGEVLSKGGGNHSDSGWCHVNDTVQRSYFGDGVVQTRPLSHHNQYSNYRTHFNFFLRQTIAKALETYTNHQLSLTSLVCFVGTLQAIVVTCVVENNPSAWKIGFDMNLLAAAYAGIVTSSLSYYVQGLVIKKKGPVFATAFSPLMMIIVAVMSSFILAEQIYVGGVIGSILIVIRLYSVLWGKHKERVERKVAEAKEIALPMKASQVDENNNNNYSSDGKQLINNESKLEESFNNNNSVLISMPHSTNQEP 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g1073 382 Pfam EamA-like transporter family 199 309 IPR000620 GO:0016020
Lele32g1073 382 Pfam EamA-like transporter family 17 122 IPR000620 GO:0016020
Lele32g1073 382 PANTHER WAT1-RELATED PROTEIN 192 325 IPR030184 GO:0016020|GO:0022857
Lele32g1073 382 SUPERFAMILY Multidrug resistance efflux transporter EmrE 235 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g1073 Lele-ChrLele32 8408949 8412209 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g1073 1 382 Nodulin-like Gene Family AT5G07050 52.471 1.67e-139 401