Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g1045 ATGGTCAAAGTTATCTTCAACAAGATCTTTTTGTCCTTCAATTCCATATCAGGACATATTCCCAAGGAGATTGGCGATCTTCAAAATTTGAAAGTTATTGCATTATTTGGTAATAATCTTTCTGGCCAAATACCATCAAATATGTTCAATATATTGGAGTTGCACAAGATTGATTTAGGAAATAACCATTTGACAGGAGATATTCCTAATGGAATTGATAATCTAAAAAATGCCGACTTTATAAGTTTGAGTAATAATCAGCTCTCTGGACGTATACCTAGAGGCATTGGAAATTTGACTATGCTTCAAGAGCTATATCTTGATCATAATAACTTACAAGGAGATATTCCTGATGGAATTGCTAATCTAAAAGATGCGGCCTTTATAAGTTTGAGTAATAATCAGCTTTCTGGACGAATACCTAGAGGCATTGGAAATTTGACTATGCTTCAAGTGTTATATCTTGATCATAATAACTTCCAAGAGTTATATTTACCATTCAACTTTTTCAAAGGTTCAGTCCCTATGGAAATAGGCAATCTTGATGAAGGACAATCTAAGACTCAGACAGAAACAATACCTACTGTTGGCTATATTGCACCAGAGTATGGATCTTTTGGAGTTGTTTCAACGAAAGCAGATGTGTATAGTTATGGAATTACACTGATAGAAGTTTTCACAAGGAAGAAACCAATAGAAGATATGTTTGTATCAAGGATGAGTTTAAGGAATTGGGTAAGCGCATCAGTGCCACATGCAATAATTCAAATCATAGATTCCAATTTATTACAAGGAGATGAACAACATATTGGTAATATATTGACATCTACATGCTCTATTCTTGAGTTGGCATTGAATTGTTGCAATGATGTTCCAGAAACACGGAACAATATGACAGATGTTGTAGCATCATTAAACAAGATCAAGATCATGTTTAAGAAAAGGAATAAAACCATATTTGGACGCATTGCCTAG 975 0.3385 MVKVIFNKIFLSFNSISGHIPKEIGDLQNLKVIALFGNNLSGQIPSNMFNILELHKIDLGNNHLTGDIPNGIDNLKNADFISLSNNQLSGRIPRGIGNLTMLQELYLDHNNLQGDIPDGIANLKDAAFISLSNNQLSGRIPRGIGNLTMLQVLYLDHNNFQELYLPFNFFKGSVPMEIGNLDEGQSKTQTETIPTVGYIAPEYGSFGVVSTKADVYSYGITLIEVFTRKKPIEDMFVSRMSLRNWVSASVPHAIIQIIDSNLLQGDEQHIGNILTSTCSILELALNCCNDVPETRNNMTDVVASLNKIKIMFKKRNKTIFGRIA 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g1045 324 Gene3D Ribonuclease Inhibitor 69 162 IPR032675 -
Lele32g1045 324 SMART LRR_typ_2 99 123 IPR003591 -
Lele32g1045 324 SMART LRR_typ_2 147 172 IPR003591 -
Lele32g1045 324 SMART LRR_typ_2 27 51 IPR003591 -
Lele32g1045 324 SUPERFAMILY Protein kinase-like (PK-like) 188 312 IPR011009 -
Lele32g1045 324 SUPERFAMILY L domain-like 9 181 - -
Lele32g1045 324 FunFam Piriformospora indica-insensitive protein 2 68 165 - -
Lele32g1045 324 Gene3D Transferase(Phosphotransferase) domain 1 170 310 - -
Lele32g1045 324 Pfam Leucine rich repeat 53 112 IPR001611 GO:0005515
Lele32g1045 324 ProSiteProfiles Protein kinase domain profile. 1 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele32g1045 324 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 13 182 - -
Lele32g1045 324 Gene3D Ribonuclease Inhibitor 7 68 IPR032675 -
Lele32g1045 324 Pfam Protein tyrosine and serine/threonine kinase 185 239 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g1045 Lele-ChrLele32 7668739 7678302 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g1045 27 218 Receptor kinase-like Gene Family AT4G08850 33.333 2.72e-18 84.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lele32g1045 PK_Tyr_Ser-Thr 2.7e-08 CL0016