Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g1024 ATGAGCCAGAACAGTCACCACCAATTCAGACCGTACGGTCCGTCAGAGTTCAGGAAAATGCTGGTTCACTTAGCCCTGAACCAAATCCAAGCCATGCATAAGGAAGCTCAAGAACATGCCCCGAAACGTCTGACCAAGATGCAGAAATGTGTGTTCAGTGATTGTTTAAAGCTCTATGACAACACCATCTTCCATCTCAACCGAACCCTTCAAGCCCTACAAGCGGCTTCTTGCTCGCTTTCAGATGCACAAACATGGCTCAGCACTGCCCTCACTAACATCGAAACCTGCCAGAGCGGCGTGTTGCAGCACGGACTCGTCTCTCCAAATAATGCGAGCACCAACGTTAGAAAGATGATAAGCAATGTCTTAGCTGTGAATGGTAAATTTCTGAAGCAAGATAATTACAGTACAGAAGAAGAAGATATCAAAGCACATGGTTTTCCAAGCTGGTTTTCTCGGCATGACCGGAGGTTGTTGAGCTTGAGGCGATCGTCAGTGAAGGCTCATCTGGTGGTTGCTCAAGACGGGACGGGGCATTTCAAGACCGTGCAAGCGGCCATTGATGTTGCCGCAAGGAGAAGAGTTAAGACGAGGTTAGTGATAAGGGTGAAGAAAGGGATATATGAAGAGAACATTGAAGTTGATAAGGGTAATGAAACTCTTATGATTGTTGGTGATGGAACCAGACTCACCATTTTAACTAGCAGTAGAAGTGTGAAAGATGGAATTACCCCCGCCAGCTCCGCAACAGCAGGCATAGACGGTGCTCACTTTATTGCACGAGACATCACTATCAGAAACACGGCCGGTCCCGAAAAAGGCCAAGCGGTGGCTCTCCGATCAGCCTCCGACCTCTCTGTCTTCTACCGGTGTTCCATCGAAGGCTACCAAGACACACTAATGGCTCATGCACAACGTCAATTCTATAGAGACTGTAGAATCTTCGGTACAGTGGATTTCATATGGGGCAATGCCGCAGTTGTTCTACAAAACTGCAGAATTCTCGTAAGAAAGCCACTTGAAGGACAAGCCAACATGATCACAGCACAAGGACGAGGCGACCCGTTTCAGAACACCGGAATATCGATCGTCAATTCTCAGATTCGAGCGGCGCCAGATTTCAGGCGAGTTTCAAAGTCATTTGAGACCTATTTGGGTCGGCCATGGCAGCAATATGCAAGAGTGGTTGTCATGAAGAGTTACATTGAAGGACTGGTGAATCGTAAGGGGTGGTCTCCATGGGGTGAAAGTGATAATTTTGCTCAAGATACGTGCTATTTTGGGGAATATATGAACTTTGGGGCAGGTTCGTCAACAAAAAGTAGGGTACAATGGAGTGGGTTTCATGTTATAAGTAATCCAAATGAGGCAAACCAGTTCAGCGTTGCTGCTTTCCTTGCTGGTCGCACATGGTTGCCTCGCACTGGGGTCCCTTTTAGTAATGGTGTTTAA 1455 0.4715 MSQNSHHQFRPYGPSEFRKMLVHLALNQIQAMHKEAQEHAPKRLTKMQKCVFSDCLKLYDNTIFHLNRTLQALQAASCSLSDAQTWLSTALTNIETCQSGVLQHGLVSPNNASTNVRKMISNVLAVNGKFLKQDNYSTEEEDIKAHGFPSWFSRHDRRLLSLRRSSVKAHLVVAQDGTGHFKTVQAAIDVAARRRVKTRLVIRVKKGIYEENIEVDKGNETLMIVGDGTRLTILTSSRSVKDGITPASSATAGIDGAHFIARDITIRNTAGPEKGQAVALRSASDLSVFYRCSIEGYQDTLMAHAQRQFYRDCRIFGTVDFIWGNAAVVLQNCRILVRKPLEGQANMITAQGRGDPFQNTGISIVNSQIRAAPDFRRVSKSFETYLGRPWQQYARVVVMKSYIEGLVNRKGWSPWGESDNFAQDTCYFGEYMNFGAGSSTKSRVQWSGFHVISNPNEANQFSVAAFLAGRTWLPRTGVPFSNGV 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g1024 484 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 11 131 IPR035513 -
Lele32g1024 484 SUPERFAMILY Pectin lyase-like 166 483 IPR011050 -
Lele32g1024 484 TIGRFAM PME_inhib: pectinesterase inhibitor domain 14 127 IPR006501 GO:0004857
Lele32g1024 484 PANTHER PECTINESTERASE 14 474 - -
Lele32g1024 484 Pfam Plant invertase/pectin methylesterase inhibitor 16 125 IPR006501 GO:0004857
Lele32g1024 484 SMART PMEI_2 1 126 IPR006501 GO:0004857
Lele32g1024 484 Pfam Pectinesterase 171 469 IPR000070 GO:0030599|GO:0042545
Lele32g1024 484 Gene3D Invertase/pectin methylesterase inhibitor family protein 2 130 IPR035513 -
Lele32g1024 484 Gene3D - 164 484 IPR012334 -
Lele32g1024 484 CDD PMEI-like_3 14 132 - -
Lele32g1024 484 FunFam Pectinesterase 164 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g1024 Lele-ChrLele32 7412896 7414490 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g1024 5 484 Carbohydrate Esterase AT5G51490 54.082 0.0 532