Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g1022 ATGCTGGTTCAGTTAGCCATGGAACAAGCTCAAGCTGAGCATAAGCGCTACAAGACAGTCAGCACTGCCCTCACAAACATCGAAACTCGCCAGAGCGGCGTGTTGCAGCTCGGCGTAGGAGAGTTCACGGCTCAAAATAATGCGAGCCACCACAATGTTAGGAAGATGATAAGCAATGTGCTAGCCGTGAATGGGAAGTTTCTGAAGCAAAAGAATTACACGGAGAAAGAGATCAAACCACGTGGTTTTCCGAGTTGGTTTTCTGGGCACGAAAGGATATTGTTGAGCTTGAGTTCATCTTCTTTGAAGGCTAATCTTGTGGTGGCTGAAGATGGTACCGGCCATTTTAAGACGTTGCAAGCCGACATTGGTGAAGCTTCAAGGAGAACAGTGAAGAATAGGTTTGTGATAAGAGTGAAGAAAAGGGTTTATGAAGAGAATATTGAAGTTGATAAGAATAATGAAAATCTCATGATTGTTGGAGATGGAATGAGAAGTACCATTATAACTGGTAATAGAAGCGTTAAAGATGGAATTACTCCTTCTTTGTCTGCAACAGATCACCGGAATATCAATAATCAATTCCTAAATCCGAGCCGCGCCGAATCTCAGTTCGGTTGTCGACTCGTATAA 633 0.4329 MLVQLAMEQAQAEHKRYKTVSTALTNIETRQSGVLQLGVGEFTAQNNASHHNVRKMISNVLAVNGKFLKQKNYTEKEIKPRGFPSWFSGHERILLSLSSSSLKANLVVAEDGTGHFKTLQADIGEASRRTVKNRFVIRVKKRVYEENIEVDKNNENLMIVGDGMRSTIITGNRSVKDGITPSLSATDHRNINNQFLNPSRAESQFGCRLV 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g1022 210 Pfam Pectinesterase 105 186 IPR000070 GO:0030599|GO:0042545
Lele32g1022 210 PANTHER PECTINESTERASE 15 186 - -
Lele32g1022 210 SUPERFAMILY Pectin lyase-like 101 190 IPR011050 -
Lele32g1022 210 Gene3D - 99 197 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g1022 Lele-ChrLele32 7386523 7387302 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g1022 20 186 Carbohydrate Esterase AT5G51500 52.381 1.56e-43 151