Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g1021 ATGGCTTCAATCATTGTTAAGCTTTTCTTTTCCCTCCCTTTATTCTCTTCACTTCTCTCAGTATCATCATCTTCTTCTTCTTCTTCATCTTCATCTATAGATTTCTGGTGTAACCAAACTCCTCACCCTGAGCCATGCAAATACCACATGAGCCAGAACAGTCACGACTGGTTCAGACCGAAGCATCCGTCAGAGTTCAGGAAAATGCTGGTTCAATCAGCACTGAACCAAACCCAAGCCATGCATAAGGAAGCTCAAGAATATGGCCCTAAATGTGTGACCAAGATGCAGAAATGTGTGTTCAGTGATTGTTTAAAGCTGTATGACAACACATTCTTCCATCTAAACCGAACCCTTCAAGGCCTACACACTTCTTCTTGCTCGCTTTCAGACGCACAAACATGGCTCAGCAGTGCCCTCACTAACATTGAAACTTGCCGGAGCGGCATGTTGCAGCACGGAATCGTCGGAGAGTTTACAGCTCCAAATAATGCGAGTGACAACGTTAGGAAGATGATAAGCAATGTGTTAGCTGTAAATGGGAAGATTCTGAAGAAAGAGAATCACAGTACAGCAGAAGAAGAGATCAAAACGCATGGTTTTCCAGGCTGGTTTTCTCGGCATGACCGGAGGTTGTTGAGCTTGAAGCGATCCTCGGTGAAGGCACATCTTGTGGTGGCTCAAGATGGGACGGGGCATTTCAAGACGGTGCAAGCGGCCATTGATGTAGCGGCAAGGAGAAGAGTGAAGACGAGGTTTGTGATAAGAGTGAAGAAAGGGATATATGAAGAGAACATTGAAGTTGATAAGGATAACGAAAATCTCATGATTGTTGGAGATGGCACCAGACTCACCATTATTACCGGCAGTAGAAGCGTGAAAGACGGAATTACCCCGGCTAGCTCCGCAACAGCAGGTATAGATGGTGCTTACTTTATTGCACGAGACATCACTTTCAGAAACGCGGCCGGTCCCGAAAAAGGCCAAGCGGTGGCTCTCCGATCAGCCTCCGACCTCTCTGTCTTCTACCGATGCTCCATCGAAGGCTACCAAGACACACTAATGGCTCATGCACAACGTCAATTCTATAGAGACTGTAGAATCTTCGGTACAGTTGATTTCATATGGGGCAATGCTGCAGTTGTTCTACAAAACTGCAGAATTTTTGTAAGAAAGCCACTGCAAGGGCAAGCCAACATGATCACAGCACAGGGACGAGGCGACCCGTTTCAGAACACCGGAATATCGATCATCAATTCTCAGATTCGAGCGGCGCAAGATTTCAGGCATGTTTCAAAGTCATTTGAGACCTATTTGGGTCGGCCATGGCAGCAATATGCAAGAGTGGTTGTCATGAAGACTTACATGGAAGGACTGGTGAATCCTAAGGGGTGGTCTCCATGGGGTGAAAGTGATAATTTTGCTCAAGATACGTGCTATTTTGGAGAATATATGAACTTTGGGGCAGGTTCGTCAACAAAAAGTAGGGTACAATGGAGTGGGTTTCATGTTATAAGTAATCCAAATGAGGCAAACCAGTTCAGCGTTGCTGCTTTCCTTGCTGGTCGCACATGGTTGCCTCGCACTGGGGTCCCTTTTAGTAATGGTGTTTAA 1614 0.4597 MASIIVKLFFSLPLFSSLLSVSSSSSSSSSSSIDFWCNQTPHPEPCKYHMSQNSHDWFRPKHPSEFRKMLVQSALNQTQAMHKEAQEYGPKCVTKMQKCVFSDCLKLYDNTFFHLNRTLQGLHTSSCSLSDAQTWLSSALTNIETCRSGMLQHGIVGEFTAPNNASDNVRKMISNVLAVNGKILKKENHSTAEEEIKTHGFPGWFSRHDRRLLSLKRSSVKAHLVVAQDGTGHFKTVQAAIDVAARRRVKTRFVIRVKKGIYEENIEVDKDNENLMIVGDGTRLTIITGSRSVKDGITPASSATAGIDGAYFIARDITFRNAAGPEKGQAVALRSASDLSVFYRCSIEGYQDTLMAHAQRQFYRDCRIFGTVDFIWGNAAVVLQNCRIFVRKPLQGQANMITAQGRGDPFQNTGISIINSQIRAAQDFRHVSKSFETYLGRPWQQYARVVVMKTYMEGLVNPKGWSPWGESDNFAQDTCYFGEYMNFGAGSSTKSRVQWSGFHVISNPNEANQFSVAAFLAGRTWLPRTGVPFSNGV 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g1021 537 SMART PMEI_2 28 179 IPR006501 GO:0004857
Lele32g1021 537 TIGRFAM PME_inhib: pectinesterase inhibitor domain 10 182 IPR006501 GO:0004857
Lele32g1021 537 Pfam Pectinesterase 224 522 IPR000070 GO:0030599|GO:0042545
Lele32g1021 537 FunFam Pectinesterase 217 537 - -
Lele32g1021 537 Pfam Plant invertase/pectin methylesterase inhibitor 32 178 IPR006501 GO:0004857
Lele32g1021 537 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 184 IPR035513 -
Lele32g1021 537 PANTHER PECTINESTERASE 19 527 - -
Lele32g1021 537 Gene3D Invertase/pectin methylesterase inhibitor family protein 27 183 IPR035513 -
Lele32g1021 537 CDD PMEI-like_3 36 185 - -
Lele32g1021 537 SUPERFAMILY Pectin lyase-like 220 536 IPR011050 -
Lele32g1021 537 Gene3D - 217 537 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g1021 Lele-ChrLele32 7377241 7379046 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g1021 22 537 Carbohydrate Esterase AT3G47400 53.890 0.0 578