Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0951 ATGGATAGAAACTTTTCTGATGTCCACAGATCACATGGTTATAATGTAAATGTTCCACGTCTATGTCGTGATATTTTGAGCAGTGGCAACAGCGACACAAATGTGACCCGAAGCCGAAATACTGTAAGGGAGATACTGCACTGTTTCCAAGCTGTTTGTAGAAAATTGTTGGAAGAAGAAGCAAAGTCAAAAGGCGAAGCAAAAATTCATAGGAGGATTGATTTAGAGGCAGCAAAGATCCTTAAAAATGAAGGCAAATATGTTAATGTAGACAAGCCGATCTTTGGTTCTGTCCCTGGGGTTGAGATAGGTGATGAGTTTGATTACAGAGTGGAGCTTAATCTAGTCGGTCTTCATCGCCATTTACAGGCTGGCATAGATTATGCCATGCGCGATGGTGTGCTCCTTACTGCTAGTATTGTTGCATCAGGGGGGTATGATGATGAGTTGAATAATTCAGGTGTCTTGATTTATTTGGGGCACGGAGGCAATTCGATTTACTCTAAGAAAAAACCTGAAGACCAGAAGCTTGAGCGGGGTAATCTTGCTTTGAAGAACAGTATCAATAAAAGAAATCGTGCATTGGTTGGCACTGATTTGTGTTACGAAGAATCAGACCTCGAGCTGGAAATGAAACTTACAAGCCATGAGAGTGCAGGTCGAAAGCATGCAGCAAAGGACATGGAGGGTACTAAAAGGACTTTTGTGGAAGCGAAAGTGTTTGATGAATATCAGATAGCGTATGTTGCTTTGATAATATGGTTCATCTGGAAAGGAAGGAACAGTTTGATTTTTGAGTATAAATTGCCTGACCATATGACAGTGGTGAATGTGGCAGGGAAAGCAGTGGATGAATTTTGGAAAGCTAAGTCTCCCTGGAATGAGGAAGGTGAATTCTTGTGGGGATTTGGTGAGATGGTACATGCTGAATCGGCTGTAGTTGCTGAGATACTGGTTAAGAAAACAGAGGAGGGTATTGATAGGAGAGGGGATTGGGAAATGCAGGAGGTTATTTTTACCTTAGATGAACTCAGGATTGTGGAAGTTACTCTGGTGACAAGAAAGAGTAATATGGCAGCTGGAGATGAAACTTATGAAAAGCATGCAGCAAATAACATGGAGACTCAGAAAATGTTTCTGCATAGAAACTCCATAGCTCTGTTGGTGATTCCCATTATTGCTGTTTTTGTATATTTCATTGTTGTTCATGAGGCTGATCAAAATGAGCAGTTGTTTCTGGGTGATTTATTGTCCTCGTTCTCTTCAAGTCATGGTCGTCACCACCACCACCATCATTCCCACAAGAAACGACCTGATGATAGCAGCAGCAGTGATATTAGCAATATATGTGATGATTTTCCTCCGGGAATTCCACCGCCAAATACCAACACGACGACGTATCTGTGTGTTGATCGACGAGGGTGCTGCAATTTCACAATCGTGCAAGCAGCTGTAAATGCTGTCCCAGCTTTTAGCGATAAAAGAAACATTATATGGATTAACAGTGGCCTTTATTATGAGAAAGTGATGGCACCAAGAAGTAAACCAAACATCACATTTCAAGGACAAGGCAACACTTCAACGGCAATTGCATGGAACGACACTGCCAAGTCAGCAAACGGCACATTCTATAGTAGCTCGGTACAGAATGTGGCGCCAATTCCAGGTCCTGGGGTGGAAGGAGCACAAGCAGTGGCAATAAGAAGAGGGGGTGATCAAGCTCAGTTCTGGGGATGTGGCTTTTTTGGAGCACAAGATACTCTTCATGATGATAGGGCTCCAGATATGGCGTCTTTCAATGAGGCACCTCCTGGTAATCCCCAGGCTGGCGAGAAAATCTTCAAGACCAAGTGCGCTCAGTGCCACACCGTCGTCAAAGGTGCTGGCCACAAGCAAGGACCCAATCTAAATGGTTTGTTTGGAAGGCAATCTGGCACTACTCCTGGATATTCCTATTCTGCTGCAAACAAGAACATGGCTGTGATCTGGGAGGAAAAGACTTTATATGATTACTTGCTCAACCCCAAAAAGTATATTCCAGGGACAAAGATGGTGTTTCCAGGTTTAAAGAAGCCTCAGGAACGTGCAGACCTTATTGCGTACTTGAAACAATCCACTTCACAATGA 2127 0.4316 MDRNFSDVHRSHGYNVNVPRLCRDILSSGNSDTNVTRSRNTVREILHCFQAVCRKLLEEEAKSKGEAKIHRRIDLEAAKILKNEGKYVNVDKPIFGSVPGVEIGDEFDYRVELNLVGLHRHLQAGIDYAMRDGVLLTASIVASGGYDDELNNSGVLIYLGHGGNSIYSKKKPEDQKLERGNLALKNSINKRNRALVGTDLCYEESDLELEMKLTSHESAGRKHAAKDMEGTKRTFVEAKVFDEYQIAYVALIIWFIWKGRNSLIFEYKLPDHMTVVNVAGKAVDEFWKAKSPWNEEGEFLWGFGEMVHAESAVVAEILVKKTEEGIDRRGDWEMQEVIFTLDELRIVEVTLVTRKSNMAAGDETYEKHAANNMETQKMFLHRNSIALLVIPIIAVFVYFIVVHEADQNEQLFLGDLLSSFSSSHGRHHHHHHSHKKRPDDSSSSDISNICDDFPPGIPPPNTNTTTYLCVDRRGCCNFTIVQAAVNAVPAFSDKRNIIWINSGLYYEKVMAPRSKPNITFQGQGNTSTAIAWNDTAKSANGTFYSSSVQNVAPIPGPGVEGAQAVAIRRGGDQAQFWGCGFFGAQDTLHDDRAPDMASFNEAPPGNPQAGEKIFKTKCAQCHTVVKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKQSTSQ 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0951 708 Gene3D - 601 707 IPR036909 GO:0009055|GO:0020037
Lele32g0951 708 ProSiteProfiles YDG domain profile. 96 271 IPR003105 -
Lele32g0951 708 Pfam SAD/SRA domain 95 192 IPR003105 -
Lele32g0951 708 Pfam Cytochrome c 608 705 IPR009056 GO:0009055|GO:0020037
Lele32g0951 708 SUPERFAMILY Cytochrome c 604 704 IPR036909 GO:0009055|GO:0020037
Lele32g0951 708 SMART G9a_1 91 219 IPR003105 -
Lele32g0951 708 PRINTS Class IA and IB cytochrome C signature 617 624 IPR002327 GO:0009055|GO:0020037
Lele32g0951 708 PRINTS Class IA and IB cytochrome C signature 630 645 IPR002327 GO:0009055|GO:0020037
Lele32g0951 708 PRINTS Class IA and IB cytochrome C signature 646 656 IPR002327 GO:0009055|GO:0020037
Lele32g0951 708 PRINTS Class IA and IB cytochrome C signature 660 676 IPR002327 GO:0009055|GO:0020037
Lele32g0951 708 PRINTS Class IA and IB cytochrome C signature 679 689 IPR002327 GO:0009055|GO:0020037
Lele32g0951 708 PRINTS Class IA and IB cytochrome C signature 696 704 IPR002327 GO:0009055|GO:0020037
Lele32g0951 708 Gene3D - 78 206 IPR036987 -
Lele32g0951 708 PANTHER CYTOCHROME C 507 706 IPR002327 GO:0009055|GO:0020037
Lele32g0951 708 MobiDBLite consensus disorder prediction 424 456 - -
Lele32g0951 708 Pfam Pectinesterase 470 589 IPR000070 GO:0030599|GO:0042545
Lele32g0951 708 ProSiteProfiles Cytochrome c family profile. 605 706 IPR009056 GO:0009055|GO:0020037
Lele32g0951 708 Coils Coil 702 708 - -
Lele32g0951 708 Gene3D - 419 600 IPR012334 -
Lele32g0951 708 SUPERFAMILY Pectin lyase-like 466 592 IPR011050 -
Lele32g0951 708 FunFam Cytochrome c iso-1 602 707 - -
Lele32g0951 708 SUPERFAMILY PUA domain-like 87 188 IPR015947 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0951 Lele-ChrLele32 6511615 6525563 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0951 448 593 Carbohydrate Esterase AT1G05310 66.250 1.79e-66 223