Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0950 ATGGAAGAAGAAGGCGACACCAGCAAACAAGGATCTGTCATGGATTCTCCGGCTCCGGCATCGTCTTACCGGGGAGTTCGCAAGCGAAAATGGGGCAAATGGGTGTCGGAAATCCGTGAGCCCGGCAAGAAAACTCGTATATGGTTAGGAAGCTATGAAACTCCAGAAATGGCTGCAGCGGCCTATGATGTTGCAGCCTCACACTTCCGAGGACAGTCAGCACGACTTAACTTCCAGGAGTCCAACGGAATTTTTCCGCGGCCGGCAAGCTCTCGAGCGGAGGACGTCCGGTTCGCGGCTCAACAAGCGGCCTTGATGATGAGGAGACCATTGAGATGTAAATCAACAAAGGAATCAGCGGAAGGCGGCAGTGTAGCTCCGGCGGCGGCGACAACGCCGGTGGGGCTGTCACCAAGCCAGATTCAGGCGATCAACGAGTGGCCATTGGACTCACCGAAGATGTGGATGCAAATGGCTGAAGCTCTCATGTCAGGGTTTGATGAATCTATGGCATTATATAATCACGATGATGAAGATGAAGATGATTTGGAATTCACAAGTTGGGAACAAATACAAGATGATTCTATATGGGGTTTCTAA 600 0.5117 MEEEGDTSKQGSVMDSPAPASSYRGVRKRKWGKWVSEIREPGKKTRIWLGSYETPEMAAAAYDVAASHFRGQSARLNFQESNGIFPRPASSRAEDVRFAAQQAALMMRRPLRCKSTKESAEGGSVAPAAATTPVGLSPSQIQAINEWPLDSPKMWMQMAEALMSGFDESMALYNHDDEDEDDLEFTSWEQIQDDSIWGF 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0950 199 MobiDBLite consensus disorder prediction 1 29 - -
Lele32g0950 199 SMART rav1_2 22 85 IPR001471 GO:0003700|GO:0006355
Lele32g0950 199 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 19 163 - -
Lele32g0950 199 Pfam AP2 domain 22 71 IPR001471 GO:0003700|GO:0006355
Lele32g0950 199 CDD AP2 21 81 IPR001471 GO:0003700|GO:0006355
Lele32g0950 199 Gene3D AP2/ERF domain 22 80 IPR036955 GO:0003700|GO:0006355
Lele32g0950 199 ProSiteProfiles AP2/ERF domain profile. 22 79 IPR001471 GO:0003700|GO:0006355
Lele32g0950 199 SUPERFAMILY DNA-binding domain 21 80 IPR016177 GO:0003677
Lele32g0950 199 PRINTS Ethylene responsive element binding protein signature 23 34 IPR001471 GO:0003700|GO:0006355
Lele32g0950 199 PRINTS Ethylene responsive element binding protein signature 45 61 IPR001471 GO:0003700|GO:0006355
Lele32g0950 199 FunFam Ethylene-responsive transcription factor 2 21 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0950 Lele-ChrLele32 6502023 6502622 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0950 21 197 AP2-EREBP Transcription Factor Family AT1G71450 49.189 1.55e-49 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele32g0950 AP2 1.6e-13 CL0081