Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0943 ATGAGTTGCAGCTCCGGCGACAACCATGGAGGAAGCGTCACAAACAGGGACAGCGCCGTCAAGTACAAGGGAGTCCGGCGAAGGAAATGGGGCAAGTGGGTGTCGGAGATTCGAGTCCCGGGGTCACAAGAGCGGCTGTGGTTGGGTACCTATGCATCGCCGGAGGCTGCAGCGGTGGCTCATGACGTGGCTTTCTACTGCTTGAGGAGACCGGCGTCATTGGAGAAGCTCAACCTCCCAGAGATGTTGCCTTCTTGTTATGTCTGGCAGCATCGAGAAATGTCGCCGAGGTCCGTGCAGACGGCGGCGTCAAATGCTGGCGTGGCTGTTGATGCGCAGAGGATTGTAGAAGCAGAAGAGAAGAATGAGAAAACTGATGAGAACAGAGAAAACAGAGACATGAATGATGGATTTTGGTGGGACTGGAACCGTGACGGCGGCGGCGGAGACGGCCCTTTTTGGCCAGGAATGGATGAACGTTGTACACAAGGAGAAGAATCGAGCATTTCCGTTGATGATTATTTTCAGGATCTTCAACATTTTAAGAAGTTCTGA 555 0.5315 MSCSSGDNHGGSVTNRDSAVKYKGVRRRKWGKWVSEIRVPGSQERLWLGTYASPEAAAVAHDVAFYCLRRPASLEKLNLPEMLPSCYVWQHREMSPRSVQTAASNAGVAVDAQRIVEAEEKNEKTDENRENRDMNDGFWWDWNRDGGGGDGPFWPGMDERCTQGEESSISVDDYFQDLQHFKKF 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0943 184 PRINTS Ethylene responsive element binding protein signature 22 33 IPR001471 GO:0003700|GO:0006355
Lele32g0943 184 PRINTS Ethylene responsive element binding protein signature 44 60 IPR001471 GO:0003700|GO:0006355
Lele32g0943 184 CDD AP2 21 81 IPR001471 GO:0003700|GO:0006355
Lele32g0943 184 Gene3D AP2/ERF domain 20 81 IPR036955 GO:0003700|GO:0006355
Lele32g0943 184 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 18 126 - -
Lele32g0943 184 Pfam AP2 domain 21 70 IPR001471 GO:0003700|GO:0006355
Lele32g0943 184 SUPERFAMILY DNA-binding domain 21 72 IPR016177 GO:0003677
Lele32g0943 184 SMART rav1_2 21 86 IPR001471 GO:0003700|GO:0006355
Lele32g0943 184 ProSiteProfiles AP2/ERF domain profile. 21 80 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0943 Lele-ChrLele32 6433910 6434464 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0943 17 122 AP2-EREBP Transcription Factor Family AT1G22810 60.377 4.97e-40 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele32g0943 AP2 5.6e-11 CL0081