Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0913 ATGATGGACGGAGTTCATGGCGGTGCGGCGGCAAATGTGAATTCTCCGCCGCCATTCCTTAGCAAGACCTATGACATGGTCGACGACCCTTCTACAAACTCGGTGGTCTCATGGAGTGATAATAACAACAGCTTTGTTGTTTGGGATGTGCCCGAATTCGCAAGGGATATCTTGCCCAAGTATTTTAAGCACAACAATTTCTCCAGCTTCGTCAGGCAATTGAATACTTACGGTTTTAGAAAGGTTGACCCAGACCGCTGGGAATTTGCAAGTGAAGGATTTTTAAGGGGTCAGAAACAACTTTTGAAGAGTATAAGTAGGAGGAAACCTGCTCAAGTGAATGGTAATCAACAGCCACAGCCATCTCCGGCACAGAACAAACCTGTTGGGGCATGTATTGAGGTTGGAAAGTTTGGGCTTGAGGAAGAGATTGAAAGATTGAAAAGGGATAAGAATGTTCTTATGCAAGAACTTGTAAGGTTGAGACAACAGCAACAAGCAACTGATAACCAATTGCAAAGTGTTGGGCAACGTGTGCAGGTTATGGAGCAGCGTCAACAACAAATGATGTCATTTCTGGCAAAGGCCATGCAAAGCCCAGGATTCTTGGCACAGTTTGTACAGCAACAGAGTGACAGTAACAGACATATTACTGGAGGCAATAAAAAGAGGAGACTCCATAGGCAGGAAGAAGATACGTTACCCTCTGATAATCTCTATAATGCTCTTGATGGACGTGTTATTAAGTATCAACCTTCTATGAATGAGGCTGCGAAAGCATTAATGCGCCAGATATTGCAAATGAATTCTTCTTCAAGGAGAGAATCATCAATAAATAACCCTGATGCTTTTCTCATTAATGATGTTCCTTCTGCCATTCCGTTAGATAGTGGGAGTTCCTCTAGTCGGGCTTCAGGAGTGACTCTTTCTGAGGTTCCACCTACTTCTGGTCAGTCTTATATGGCAGGGCAGTCACAATTCCCTGTTAATCGTGTTCCCACCAACATATCTGAGATGCAATCTTCCAGTGCTGTGTTGACTGACCCTGTTAAAGTAGCTGAATTTCCGGGGTTAAATTTGCATAGTTGCCCAGAGAATGTTTTGGGTATTGGTGAAGTCCAAGGTGTGGAGATAGACAGCAGTTTAGTGAACCCTGAACTCACTTTTGCGGGGCCCAACACTGGGAATGCAGGGGACATAGACATGATGTCAGCAGTTTTGGATGGGACACAGTCTGTAGAACTAGAAGCTGATGCCTTTTCCCCTGATCCAGATGGAATTTCTAAGCTCCCAAGCATTAGTGATGTTTTCTGGGAACAGTTTCTCACAGCAAGTCCGCTTACAGGAGATACAGATGAAATTATTTCTCCCTCTCTTGGAGATGATTTGACCAAGGAAGGGGAATCTCCATCTAGAAAGGAGAATGGACAGGAAAAGTTGGATAAGATAAAACATATGGATCATCTTACTCAACAGATGGAACTTCTTGCTTCCAACACTTCCTAA 1506 0.4376 MMDGVHGGAAANVNSPPPFLSKTYDMVDDPSTNSVVSWSDNNNSFVVWDVPEFARDILPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFASEGFLRGQKQLLKSISRRKPAQVNGNQQPQPSPAQNKPVGACIEVGKFGLEEEIERLKRDKNVLMQELVRLRQQQQATDNQLQSVGQRVQVMEQRQQQMMSFLAKAMQSPGFLAQFVQQQSDSNRHITGGNKKRRLHRQEEDTLPSDNLYNALDGRVIKYQPSMNEAAKALMRQILQMNSSSRRESSINNPDAFLINDVPSAIPLDSGSSSSRASGVTLSEVPPTSGQSYMAGQSQFPVNRVPTNISEMQSSSAVLTDPVKVAEFPGLNLHSCPENVLGIGEVQGVEIDSSLVNPELTFAGPNTGNAGDIDMMSAVLDGTQSVELEADAFSPDPDGISKLPSISDVFWEQFLTASPLTGDTDEIISPSLGDDLTKEGESPSRKENGQEKLDKIKHMDHLTQQMELLASNTS 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0913 501 PRINTS Heat shock factor (HSF) domain signature 70 82 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele32g0913 501 PRINTS Heat shock factor (HSF) domain signature 19 42 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele32g0913 501 PRINTS Heat shock factor (HSF) domain signature 57 69 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele32g0913 501 MobiDBLite consensus disorder prediction 296 321 - -
Lele32g0913 501 SUPERFAMILY "Winged helix" DNA-binding domain 14 108 IPR036390 -
Lele32g0913 501 Coils Coil 137 164 - -
Lele32g0913 501 Pfam HSF-type DNA-binding 19 108 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele32g0913 501 MobiDBLite consensus disorder prediction 107 125 - -
Lele32g0913 501 MobiDBLite consensus disorder prediction 452 484 - -
Lele32g0913 501 FunFam Heat shock transcription factor 1 12 109 - -
Lele32g0913 501 MobiDBLite consensus disorder prediction 465 484 - -
Lele32g0913 501 Gene3D - 11 109 IPR036388 -
Lele32g0913 501 SMART hsfneu3 15 108 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele32g0913 501 MobiDBLite consensus disorder prediction 107 129 - -
Lele32g0913 501 ProSitePatterns HSF-type DNA-binding domain signature. 58 82 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele32g0913 501 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 13 319 IPR027725 -
Lele32g0913 501 MobiDBLite consensus disorder prediction 214 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0913 Lele-ChrLele32 6151843 6156627 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0913 13 498 HSF AT5G16820 54.930 1.08e-160 463
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Lele32g0913 HSF_DNA-bind 1.2e-32 CL0123