Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0908 ATGGGAAGAAGAAATGGAGGAAGGTCACTGCATCAAATTCTTCGTCGTCGCCTTGAGTCCTGTAAATCCAAGTACTCAACTATTGATGAAATTGTAAACCATCTTCGCGCAAATTACCCTGATTACCAGCGAACAAAACAACAAACTTTGACTCGATTTGTTCAAGAAGCTTTGGAGTCATCTAACCATGGGAACAAGCAGTTGAACAGAAAGTCCAATACTCCCATATTGAAGCCTGACACCTCAGAAGATAATGATGAAGACGAAGAAGAGGGTCAAAGTGCATCTCGAAAGAGGCGCAAAAAAGTTGATGAAAGTGAAAAGAGATTGCAAAAAATGGAGAATTTACACCTTCAAAGGTTACAAAGGGATCGGGCCCATTTGTCAACCTCTTCCACCTCAATTTCTAGTCCATCTTTGTCATCAGAGTCTGAAGAGAGTGATGGCGAAGATGGGACTGTGTCTACATCAGAGGATGCAATTTACGAGGAGAAAGTGGAACCAGCCTTTGACTTGATGAAAACAATGTTGCGGGCTTCATACTCAGAAACAAAGAATGTGAAATCTACGGCAGAGGAGAAAAACGTTGAGCAGGAGGTGACTAATAATAAGAAGGCAACTAAGATTGATGCCATGAATGGTGTTGGAGGTAACATGAAAGAGGATTTGGAACCAAAAAGGCAATTGAGAAGTTCAGTTTCGAATGGCAATGGTGATGTTGAGGTCAAGGGGAAGGGTGGACCTAGATTCAAAGATTTGGGTGGGATGAAGAAGGTGCTGGAGGAATTGAAGATGGAAGTAATTGTTCCACTTTATCATCCACAGTTGCCAAGAAAGTTAGGGGTGAGGCCAATGGCAGGGATTTTGTTACATGGACCCCCAGGGTGTGGGAAAACCACTCTAGCTCTTGCTATAGCTAATGAGACTAGTTTTCCGTTTTATCAGATATCAGCTACAGAAGTGGTTTCCGGAGTTTCAGGGGCGTCTGAAGAAAACATCAGAGAGCTTTTTTCTAAAGCATACAAGACTGCCCCATCAATAGTCTTTATTGATGAGATTGATGCAATTGCTTCAAAAAGAGAGAATTTACAACGTGAGATGGAGAAACGAATTGTGACACAATTAATGACTTCAATGGATCAATCAAGCAGGCTCTTACAACCAGCTGATAGTTCAGAAAGTTCTGATGCCCATCCTGGCTATATTCTTGTTATTGGAGCCACGAATAGGCCTGATGCTGTTGACCCTGCCCTGAGAAGGCCTGGGCGATTTGATCGTGAAATTTTCCTAGGTGTTCCTGATGAATGTGCTAGGGAGGAGATCTTGTCTGTGCTTACTTGCAATCTAAGTCTGGAGGGCTCATTTGACCTTAGAAAAATAGCCAGGTCCACGCCGGGTTTTGTTGGAGCAGATTTGGCAGCTCTTGCTGACAAGGCAGGTAACCTAGCAATGAAAAGAATTATTCATGAAAGGAAACATGAATTATCCCAAGATCTTTTAGATGAGCATGATGAAGATTGGTGGAGGGAACCTTGGTTACCAGAAGAGATGGATAAGCTTGTCATCAAAATGTCAGATTTTGAGGAAGCAGTCAAATTGGTGCAACCTTCAGCAAGAAGAGAAGGGTTTTCTTCCATTCCTAATGTAAAATGGGAAGATATTGGTGGGCTTGATCTTCTAAGACAAGAGTTTGACCGTTATATTGTTAGACGCATCAAATATCCAGATGATTATAAGGAATTTGGGGTGGATCTTGAGACAGGATTTTTGCTTTATGGACCTCCAGGGTGTGGTAAGACACTGATTGCGAAAGCTGTTGCCAATGAGGCAGGAGCTAATTTTATTCACATCAAGGGTCCTGAACTTCTAAATAAATACGTTGGAGAAAGTGAGCTAGCAGTACGGACATTGTTTAGTCGTGCAAGAACATGTTCACCTTGCATTCTTTTCTTTGACGAGGTGGATGCACTGACAACCAAACGTGGTAAAGAAGGTGCATGGGTTGTTGAGCGACTATTGAACCAGTTACTTATTGAATTAGATGGCGCAGAGCAAAGGCAAGGTGTTTTTGTTATTGGTGCCACAAACAGGCCCGAGGTGATGGACCGTGCGGTCCTTCGGCCTGGCAGGTTAGGTAAACTTCTGTATGTTCCTCTGCCAAACTCAGATGAGCGAGGTCTGATCTTAAAGGCTCTTGCAAGGAAGAAGCCAATGGATGACAGCGTAGATTTGTGTGCCATTGGAAGAATGGAAGCTTGTGAAAATCTCAGCGGTGCTGATCTTGCTGCATTGATGAACGAAGCAGCCCTGGCTGCTGCTGAAGAGAAGTTTGCATCAACAGAGAGAACTTCAGATACATTGACCATCAAGTTCAGCCATTTTGAGACTGCTCTCACTAAGATCTCTCCGTCAGTGTCAGACACGCAAAAACAATACTATCAACGATTGGCAGCGACTTTTAAGCCTGGATGA 2472 0.4316 MGRRNGGRSLHQILRRRLESCKSKYSTIDEIVNHLRANYPDYQRTKQQTLTRFVQEALESSNHGNKQLNRKSNTPILKPDTSEDNDEDEEEGQSASRKRRKKVDESEKRLQKMENLHLQRLQRDRAHLSTSSTSISSPSLSSESEESDGEDGTVSTSEDAIYEEKVEPAFDLMKTMLRASYSETKNVKSTAEEKNVEQEVTNNKKATKIDAMNGVGGNMKEDLEPKRQLRSSVSNGNGDVEVKGKGGPRFKDLGGMKKVLEELKMEVIVPLYHPQLPRKLGVRPMAGILLHGPPGCGKTTLALAIANETSFPFYQISATEVVSGVSGASEENIRELFSKAYKTAPSIVFIDEIDAIASKRENLQREMEKRIVTQLMTSMDQSSRLLQPADSSESSDAHPGYILVIGATNRPDAVDPALRRPGRFDREIFLGVPDECAREEILSVLTCNLSLEGSFDLRKIARSTPGFVGADLAALADKAGNLAMKRIIHERKHELSQDLLDEHDEDWWREPWLPEEMDKLVIKMSDFEEAVKLVQPSARREGFSSIPNVKWEDIGGLDLLRQEFDRYIVRRIKYPDDYKEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGAWVVERLLNQLLIELDGAEQRQGVFVIGATNRPEVMDRAVLRPGRLGKLLYVPLPNSDERGLILKALARKKPMDDSVDLCAIGRMEACENLSGADLAALMNEAALAAAEEKFASTERTSDTLTIKFSHFETALTKISPSVSDTQKQYYQRLAATFKPG 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0908 823 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 547 820 IPR027417 -
Lele32g0908 823 FunFam Cell division control protein 48 homolog C 433 541 - -
Lele32g0908 823 Pfam ATPase family associated with various cellular activities (AAA) 590 718 IPR003959 GO:0005524|GO:0016887
Lele32g0908 823 Pfam ATPase family associated with various cellular activities (AAA) 288 431 IPR003959 GO:0005524|GO:0016887
Lele32g0908 823 MobiDBLite consensus disorder prediction 60 79 - -
Lele32g0908 823 Gene3D - 720 799 - -
Lele32g0908 823 MobiDBLite consensus disorder prediction 91 124 - -
Lele32g0908 823 SMART AAA_5 585 721 IPR003593 -
Lele32g0908 823 SMART AAA_5 284 434 IPR003593 -
Lele32g0908 823 CDD AAA 283 431 - -
Lele32g0908 823 Gene3D - 242 431 IPR027417 -
Lele32g0908 823 Gene3D - 547 813 IPR027417 -
Lele32g0908 823 ProSitePatterns AAA-protein family signature. 689 707 IPR003960 GO:0005524|GO:0016887
Lele32g0908 823 Coils Coil 96 116 - -
Lele32g0908 823 MobiDBLite consensus disorder prediction 60 159 - -
Lele32g0908 823 Gene3D - 433 541 - -
Lele32g0908 823 PANTHER AAA-FAMILY ATPASE 79 821 - -
Lele32g0908 823 MobiDBLite consensus disorder prediction 212 247 - -
Lele32g0908 823 FunFam Ribosome biogenesis ATPase RIX7 239 431 - -
Lele32g0908 823 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 249 541 IPR027417 -
Lele32g0908 823 CDD AAA 588 719 - -
Lele32g0908 823 ProSitePatterns AAA-protein family signature. 402 420 IPR003960 GO:0005524|GO:0016887
Lele32g0908 823 FunFam ATPase, AAA family protein 547 725 - -
Lele32g0908 823 MobiDBLite consensus disorder prediction 125 143 - -
Lele32g0908 823 Pfam AAA+ lid domain 742 779 IPR041569 -
Lele32g0908 823 Pfam AAA+ lid domain 455 490 IPR041569 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0908 Lele-ChrLele32 6125083 6130828 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0908 520 819 Calmodulin-binding Proteins AT3G56690 43.934 5.09e-70 248