Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0889 ATGCATAAGGTGCTCGCTAGCAAGGATTTTTACAAAGTGTTGGAGGTTGATTATGATGCAACTGATGAAAATATCAAATTCAATTACCGAAGGCTTGCACTGAAATGGCATCCTGACAAGCACGGAGGTGACAGTGCTGTTACCTCAAAATTCCAAGAAATCAATGAAGCTTACAGTGTGTTGAGTGATCCTGCCAAACGAATTGAATATGATTTAACTGGAATCTATGAGATTCACAAGTATAGCTTGCAGGAATATCTTGCCAGATTCAAAGGGATGATACTTACCTGCAATGGACTTGGCATCAATCATGCTCAAATATGGTCACAACAATTGAATGAAAGCGTTGAATCCCACGATAAATGA 366 0.3907 MHKVLASKDFYKVLEVDYDATDENIKFNYRRLALKWHPDKHGGDSAVTSKFQEINEAYSVLSDPAKRIEYDLTGIYEIHKYSLQEYLARFKGMILTCNGLGINHAQIWSQQLNESVESHDK 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0889 121 ProSitePatterns Nt-dnaJ domain signature. 51 70 IPR018253 -
Lele32g0889 121 Gene3D DnaJ domain 2 88 IPR036869 -
Lele32g0889 121 SMART dnaj_3 8 66 IPR001623 -
Lele32g0889 121 FunFam Chaperone protein DNAj, putative 1 88 - -
Lele32g0889 121 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 5 106 - -
Lele32g0889 121 ProSiteProfiles dnaJ domain profile. 9 74 IPR001623 -
Lele32g0889 121 SUPERFAMILY Chaperone J-domain 3 96 IPR036869 -
Lele32g0889 121 Pfam DnaJ domain 9 71 IPR001623 -
Lele32g0889 121 PRINTS DnaJ domain signature 11 29 IPR001623 -
Lele32g0889 121 PRINTS DnaJ domain signature 29 44 IPR001623 -
Lele32g0889 121 PRINTS DnaJ domain signature 46 66 IPR001623 -
Lele32g0889 121 CDD DnaJ 9 63 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0889 Lele-ChrLele32 5974947 5977857 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0889 11 71 C2H2 Transcription Factor Family AT1G74250 43.939 4.44e-10 53.9