Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0853 ATGGTGATATTTAGGTCTTCGGTTCTGCAATCCGTCGAATCTGATACGATCTTGAAGAAGATGACGAACTTGAATAATATGGAGGTCATTGGATATGGTGGCTATGGGACGGTTTATAAACTAAAAATAGATGACTCAAACGCTTTTGCAGTGAAAAGACTGAACAGAGGAACTGCAGATAAAGGATTTGAGAGAGAACTGGAAGCAATGGCAAACATAAAACACCGCAATATTGTAGCTCTTCATGGATATTATACTGCTCCACATTACAATCTCCTCATATATGAGTTGATGCCTAATGGAAGTTTGGATAATTTCCTCTACAAATATTTCGATACAGGAAGAGCAACATTCAAGGGGGATGTCTACAGCTATGGATTTGTACTACTGGAGCTTTTAACTGGGAGAAAACCCAGTGATGAAACATTTATGGAAGAAGGAACGAAGTTTGTCACATGGAGACCAACAATGGAAGAAGTTGTCAACTTGCTCGAGCAAACGAAGCCGGACAAACTTGCTACAGCTCCCTGA 531 0.4011 MVIFRSSVLQSVESDTILKKMTNLNNMEVIGYGGYGTVYKLKIDDSNAFAVKRLNRGTADKGFERELEAMANIKHRNIVALHGYYTAPHYNLLIYELMPNGSLDNFLYKYFDTGRATFKGDVYSYGFVLLELLTGRKPSDETFMEEGTKFVTWRPTMEEVVNLLEQTKPDKLATAP 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0853 176 Gene3D Transferase(Phosphotransferase) domain 1 8 111 - -
Lele32g0853 176 Gene3D Transferase(Phosphotransferase) domain 1 112 171 - -
Lele32g0853 176 ProSitePatterns Protein kinases ATP-binding region signature. 30 52 IPR017441 GO:0005524
Lele32g0853 176 FunFam Receptor-like serine/threonine-protein kinase 1 97 - -
Lele32g0853 176 ProSiteProfiles Protein kinase domain profile. 24 176 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele32g0853 176 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 12 108 - -
Lele32g0853 176 Pfam Protein kinase domain 26 108 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele32g0853 176 SUPERFAMILY Protein kinase-like (PK-like) 16 167 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0853 Lele-ChrLele32 5681857 5683931 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0853 109 153 Receptor kinase-like Gene Family AT2G35620 48.889 6.68e-10 55.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Lele32g0853 Pkinase 2.1e-14 CL0016