Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0843 ATGTTTTGCTTTCTCAGAAGAATCATCCCTTCCCGAAGGCATATCCCTCCTTCAACATTTCAACAAATACTTTGCGTTCAAAACCAATGGCTCTCTGCCACTGCCAGGTACTGTAATTCAATTTCATTAGATGGGCATTCTTTCACAGTCTCATATCTCATTGACACTTGTGGCTTCTCTCCCGAAGAAGCTGCTTCGGCTTCCAAGTATGTCAGCTTCGAATCGCGAGAAAAACCAGATTTGGTTATCAATTTCTTGAAGAATCTCGGATTCTCAAACTCCCAGATTCTTCGTTTCACAAGAGAAGTCCCACAGTGTCTTCGATCTAACCCTGAGAAAACCTTACTCCCCAAGATCGAGTTTTTCATATCCAGAGGCGTTTCGAATTCAGACATCCCTAAGCTCTTATGTAGCTGTCCTACCATTATGAGAAGAAGCTTGGATAAGCACCTCATTCCTTCCTTTGATTTCTTTCGAGATTTGTTTCAATCTGATGACAAGCTCGTTAAAACTCTTAAATATTGCTCGGGCATTCTTATTGATCTTAACACCCATGCCGTGCCTAATATGAAGCTATTAAGAGAAGTCGGAGTTCCTGAATCAAATATAATGAAATTGTTGCAATTGTATCCTAGGACATTGACTAAACGTACTGCCAAATTCAATATGACAGTGGAGCAAGTTCAGGAAATGGGTTTTGATCCTTTAAAGTATCAATTTATTGTTGCCGTTTATGCATTGTTGTCACTAAGCAAATCTACATGGTCAAAAAAGGCTAATTTGTATAAGAAGTGGGGCTGGTCTGACGAGGACATTATTGCTGCTTTTAGAACGTCTCCATCTTGTATGAAGATATCTGAGGATAAAATTGATGCTATAATGGAGATTCTTGTTGATAAATTGGGCTGCCCACCTTCCACTATTCCCAGATACGCAGTAGTTCTGACATTAAGTGCAAATAAGAGAATTATTCCTCGGGCATCCGTCTTTCAAGTTTTGTTGTCAAAGGGTCTGGTGAAAAAGGAAAGATTTCTCTCATTATTTTGCTACACTGAAAGGGTGTTTCTGAAAAGATTTATCCTGAGTCATGGGGAAGAAGCTAGTGAACTCCTGAAGCTGTACCAGGCTAAACTAGATCTTGCAAGATGA 1149 0.3977 MFCFLRRIIPSRRHIPPSTFQQILCVQNQWLSATARYCNSISLDGHSFTVSYLIDTCGFSPEEAASASKYVSFESREKPDLVINFLKNLGFSNSQILRFTREVPQCLRSNPEKTLLPKIEFFISRGVSNSDIPKLLCSCPTIMRRSLDKHLIPSFDFFRDLFQSDDKLVKTLKYCSGILIDLNTHAVPNMKLLREVGVPESNIMKLLQLYPRTLTKRTAKFNMTVEQVQEMGFDPLKYQFIVAVYALLSLSKSTWSKKANLYKKWGWSDEDIIAAFRTSPSCMKISEDKIDAIMEILVDKLGCPPSTIPRYAVVLTLSANKRIIPRASVFQVLLSKGLVKKERFLSLFCYTERVFLKRFILSHGEEASELLKLYQAKLDLAR 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0843 382 Pfam mTERF 188 354 IPR003690 GO:0003690|GO:0006355
Lele32g0843 382 Pfam mTERF 83 297 IPR003690 GO:0003690|GO:0006355
Lele32g0843 382 PANTHER CGI-12 PROTEIN-RELATED 44 364 IPR003690 GO:0003690|GO:0006355
Lele32g0843 382 Gene3D Transcription termination factor 3, mitochondrial 182 373 IPR038538 -
Lele32g0843 382 Gene3D Transcription termination factor 3, mitochondrial 45 181 IPR038538 -
Lele32g0843 382 FunFam Mitochondrial transcription termination factor-like 147 367 - -
Lele32g0843 382 SMART mt_12 305 339 IPR003690 GO:0003690|GO:0006355
Lele32g0843 382 SMART mt_12 273 304 IPR003690 GO:0003690|GO:0006355
Lele32g0843 382 SMART mt_12 97 128 IPR003690 GO:0003690|GO:0006355
Lele32g0843 382 SMART mt_12 238 268 IPR003690 GO:0003690|GO:0006355
Lele32g0843 382 SMART mt_12 133 164 IPR003690 GO:0003690|GO:0006355
Lele32g0843 382 SMART mt_12 204 234 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0843 Lele-ChrLele32 5604036 5605184 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele32g0843 mTERF 1.4e-20 No_clan