Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0841 ATGTTTTGCATTCTCCGAAAAATTATCCCTCTTCGGAGGCATATCATCAACACATCCTCTCCCTCAACATTTCCACAATTTCTTAGCGTTCAAAGCCAATGGCTACCTGCCACTGCCAGGTACTGTAATTCTGTTACGTGCGATGGGGATTCTTTCACAGTCTCGTATCTCATTGACACTTGTGGCTTCTCTCCCGAAGATGCTGCTTCAGTTTCCAAGTATCTTAGCTTGAAAACGCGAGAAAAACCAGATTTGGTTATCAATTTCTTGAAAAATCTCGGATTCTCAAAATCCCAGACTCTTCATTTCACAAGAGGAGTCCCACAGTGCCTTCGATCTGACCCTGAGAAAACCTTACTCCCCAAGATCGAGTTTTTCATATCCAGAGGCGTGTCGAGCTCAGACATCCCTAAGCTCTTATGTAGCTGTCCTACCATTATGATAAGAAGCTTGGATAAGCACCTCATTCCTTCCTTTGATTTCTTTCGAGATTTGTTTCAATCTGATGACAAGCTCATTAGAACTCTTAAATACTGCTCGGGCATTCTTATTGATCTTAACACCCATGCCGTGCCTAATATGAAGCTATTAAGAGAAGTCGGAGTTCCGGAATCAAATATAATGAAATTGTTGCAACTGTATCCCAGGACATTGACTATAAGTACTGCCAAATTCAATATTATAGTGGAGCAAGTTCAGGAAATGGGGTTTGATCCGTTGAAGTGTCTATTTATTAGGGCCGTTTATGCATTGTCGTCACTAAGCAAATCTACATGGTCGAAAAAGGCCAATGTGTATAAGAAGTGGGGCTGGTCTGACGAGGACATTATTGCTGCGTTTAGAAGTTTTCCATGTTGTATGAAGGCATCTGAGGATAAGATTGATGCAATAATGGAGATTCTCGTTGATAAATTGGGCTGTCCACCTTCCACTATTCCCAGGTATGCAGTAGTTCTGACATTAAGTGCAAATAAGCGAATTATTCCTCGGGCATCTGTCTTTCAAGTTTTGTTGTCAAAGGGTCTTGTGAAAAAGAAGATATCGCTTGGAATATTTAAATTATCCGAAAAGGACTTTTTAAGGAGGCATATCTTTTGCCATGAACCGGAAGCTAATGAATTATTGAAGTTGTATCAGTCTAAATTGGGTCTTGCGAGAAAAGTGGAGACTTGA 1173 0.4066 MFCILRKIIPLRRHIINTSSPSTFPQFLSVQSQWLPATARYCNSVTCDGDSFTVSYLIDTCGFSPEDAASVSKYLSLKTREKPDLVINFLKNLGFSKSQTLHFTRGVPQCLRSDPEKTLLPKIEFFISRGVSSSDIPKLLCSCPTIMIRSLDKHLIPSFDFFRDLFQSDDKLIRTLKYCSGILIDLNTHAVPNMKLLREVGVPESNIMKLLQLYPRTLTISTAKFNIIVEQVQEMGFDPLKCLFIRAVYALSSLSKSTWSKKANVYKKWGWSDEDIIAAFRSFPCCMKASEDKIDAIMEILVDKLGCPPSTIPRYAVVLTLSANKRIIPRASVFQVLLSKGLVKKKISLGIFKLSEKDFLRRHIFCHEPEANELLKLYQSKLGLARKVET 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0841 390 SMART mt_12 101 132 IPR003690 GO:0003690|GO:0006355
Lele32g0841 390 SMART mt_12 208 238 IPR003690 GO:0003690|GO:0006355
Lele32g0841 390 SMART mt_12 65 96 IPR003690 GO:0003690|GO:0006355
Lele32g0841 390 SMART mt_12 137 168 IPR003690 GO:0003690|GO:0006355
Lele32g0841 390 SMART mt_12 277 308 IPR003690 GO:0003690|GO:0006355
Lele32g0841 390 SMART mt_12 242 272 IPR003690 GO:0003690|GO:0006355
Lele32g0841 390 SMART mt_12 309 343 IPR003690 GO:0003690|GO:0006355
Lele32g0841 390 Pfam mTERF 87 238 IPR003690 GO:0003690|GO:0006355
Lele32g0841 390 Pfam mTERF 192 359 IPR003690 GO:0003690|GO:0006355
Lele32g0841 390 Gene3D Transcription termination factor 3, mitochondrial 186 377 IPR038538 -
Lele32g0841 390 Gene3D Transcription termination factor 3, mitochondrial 65 185 IPR038538 -
Lele32g0841 390 PANTHER CGI-12 PROTEIN-RELATED 50 368 IPR003690 GO:0003690|GO:0006355
Lele32g0841 390 FunFam Mitochondrial transcription termination factor-like 151 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0841 Lele-ChrLele32 5596625 5597797 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele32g0841 mTERF 2.2e-14 No_clan