Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0840 ATGTCTGCGAAACGAGCCGAATCCATGTCTCATTCTCTCCGCAAAGCTATTGGCGCAATTTCTCCTCCAACATTTCAACATCTGATTAGTGTTCAAACCCAGTGGTTTTCATGGAGGTACGCTTATTCAACCTCGTCCAATGGGCATTCTTTCACCGTCTCATATCTTATTGACAACTGTGGCTTCTCACCCAAACAAGCTGCTTCAGCTTCTAAGCGGGTCAGCTTTGAAACGCGAGATAAGCCAGATTCGGTTATCAAGTTCCTCAAAACTCTTGGATTCTCACAGCCCCAGATTATTCGTTTCATTACAGTGGTCCCCGAGTTTCTTCGATCTGATCCTGAGAAAACCTTTCTGCCCAAGATTGAGTTTTTCAAATCCAGAGGCGTTTCGAGCTCAAACATCCCAAGGCTCATATGTTCTTCTCCTGGCATCATGAGAAGAAGCCTAAGTAAACAGCTCATTCCTTCCTTTGGTTTCTTACGAGATATTGTTCAATCTGATGAGAAGCTCATTAAAGCTCTTCAATATTGCTCTGGCATTCTTCTTGATGCCAACACCTTTGCAGTGCCTAATATGGAGCTATTACGAGAAGCAGGAGTTCCTGAATCAAATGTCATCCAATTGTTGCATTTGTATCCTAGGACATTGACTAAAAGTCCTAATCGATTTAAGGACATTGTGAAAGAAGTGGAGGAAATTGGGATTGATCCTTTGAAGGTTCAATTTATTATGGCTGTTCATGTTTGCTCAACCTTAAAAAAATCCACACGGGCTCTAAAGGCTGATCTTTATAAGAAGTGGGGTTGGCCTGACGATGACATTCTGGCGGCATTTAGAAAGTACCCGTCTTTATTCACAGTGTCAGAGGATAAGATTGATGCAGTAATGGGAATTCTTGTCAATAAATTGGGATGTGATTCTTCCACTTTGAGCAAGTACCCTACAGTTATTACGTTGAGTTTGAAAAAGCGAATTGTTCCGCGGGGTGCTGTCATTCAAGTTCTGTTGTCAAAGGGTCTAGTGAAAAAGAAGACATTGCTTGGAATATTTAAATTATCTGAAAAGGACTTCTTAAGGAGGCATATCTTTCGCCATGAGCAGGAAGCTAGTGAATTATTGAAGTTGTATCAGTCTAAACTGGATCTTGCAAGTAGCTATTTGGTTGTGCCTTCGAATTGGATGGAATCCATGTCTCGTTTTCTCGGCAGAGCGATCAGTTTTCGGAGGCACATTATCAACGCAACCTCTCCTTCAAGATTTCAACATCTGCTTTGTTCTCAAATCCAATGGATTTCTGTGAGGTACGCAAATTCAACCGCCTCAAATGGCCATTCTTTCACAGTTTCATATCTCATTGACGCATGTGGCTTTTCACCTAAACAAGCTGCTTCCGCTTCTGAGCTCTTCAGCTTGGAAACGCGAGAAAAACTAGATTTAGTTATCGATTTCCTGAAAAGACAAGGACTTTCTGAATCCCAGATTATTCGTTTCTTCTTCAAGTCCATAGGCGTTTCAAGCTCAAGCATCCCTAAGCTCATGTGCAGTTATCCTAGCATTATGCGGAGAAACTTAAGCAATCAGCTCATTCCTTCCTTTGATTTCTTTCGGGATTTGTTTAAATCTGATGAGAAGCTCGCTAAAGCTATTACATATTGCTCTGGTATTCTTCTTGATAGCAACACCCTTGCCGGTATGCTACGGGCAAACAAGGTTGATGTTTATAAGAAGTGGGTTTGGTCTGACAATGACATTCTCACAGCATTTAGAAAGAACCCCTTTTGTATGACAGTGGCAGGAGATAAGCTTGATGCAGTAATGGAGGTTCTTGTCCTCAAATTGGGCTGTGAACTTTCCACCATTAAGAGACATCCTACAGTTTTCGCACTGAGTTTGAAAAGGTTATGCGGACGACGTGTCTTTCCTGTGCACGCTCTGAGAGTGACTCCATGTCCTCCAGTGTATTCCTCAGCAGACTCCGGCTTCGTTTATCTTGCTCGAGATGCCGGAATCCATGTCTCGTTTTCTTCGCAGAGCCACACATTTTCGAAGGCATATCATCAACTTAATCTCTCCTTCAACATTTCAAAATTAGCTTTGTCTTCAAAACCAGTGGTTTTCTGTGAGATTGAATTTCTCAAATCCAGAGGCGTTTTGAGCTTACACATCTCTAAGCTCATTTCTGATTCTCCTAACATCATGAGAAGAAGCTTAGGTAAGCACATCATTCCTTACTTTGATTTCCTTCGAGATTTGTTTCAATCTGATGAGAAGCTCATCAAATCTCTTCAACATGTCTCGGTCGTTCTTCTTGATACTAAAATCTTTCTCGTGCCTAAAATAGGGCTGCTGAGAGAAGAAGGAGTTCCTCAATCAAATATCATCAAAATTTTGCGATTATACGCTAGATCATTGGCTTGTAGTACTGATCGATTTATGAGGATTGTGGAGGAAGTGAAAGAACTTGGTTTTGATCCTTTGACGTTTCAATTTCTAACGGCTGGTAACGCATGCTTATGCTTTAAAAAATCCACACGGGCTAAAAAGGCCGATGTTTATAAGAAGTGGGGTTGGTCTGACAATGACATTCTTGCAGCATTTAGAAAGGTCCCCGTCTGTATGACGCTGTCAAAGGATCAGATTGATGCAAAATTAGAGTTTCTTGTCCATAAATTGGGCTGTAATAATCCTTCCCTTATTAGCAAATATCCTATTGTTTTGGGATATAGTTTTCAAAAACGAATTGTGCCAAGAGGTGCTGTCCTTCAAGTTCTGTTGTCAAAGGGTCTGATCAAATGCAAAACTTTGCTTGTACAATTTACACTTACTGACAAGGACTTTTTAAGGAGGCTTGTCCTCTGTCATGGGCAAGAAGAAGCTAATGAGTTGTTGGAGTTGTATCGCTCAAAACTGAATCAAACAAGCTGA 2928 0.4112 MSAKRAESMSHSLRKAIGAISPPTFQHLISVQTQWFSWRYAYSTSSNGHSFTVSYLIDNCGFSPKQAASASKRVSFETRDKPDSVIKFLKTLGFSQPQIIRFITVVPEFLRSDPEKTFLPKIEFFKSRGVSSSNIPRLICSSPGIMRRSLSKQLIPSFGFLRDIVQSDEKLIKALQYCSGILLDANTFAVPNMELLREAGVPESNVIQLLHLYPRTLTKSPNRFKDIVKEVEEIGIDPLKVQFIMAVHVCSTLKKSTRALKADLYKKWGWPDDDILAAFRKYPSLFTVSEDKIDAVMGILVNKLGCDSSTLSKYPTVITLSLKKRIVPRGAVIQVLLSKGLVKKKTLLGIFKLSEKDFLRRHIFRHEQEASELLKLYQSKLDLASSYLVVPSNWMESMSRFLGRAISFRRHIINATSPSRFQHLLCSQIQWISVRYANSTASNGHSFTVSYLIDACGFSPKQAASASELFSLETREKLDLVIDFLKRQGLSESQIIRFFFKSIGVSSSSIPKLMCSYPSIMRRNLSNQLIPSFDFFRDLFKSDEKLAKAITYCSGILLDSNTLAGMLRANKVDVYKKWVWSDNDILTAFRKNPFCMTVAGDKLDAVMEVLVLKLGCELSTIKRHPTVFALSLKRLCGRRVFPVHALRVTPCPPVYSSADSGFVYLARDAGIHVSFSSQSHTFSKAYHQLNLSFNISKLALSSKPVVFCEIEFLKSRGVLSLHISKLISDSPNIMRRSLGKHIIPYFDFLRDLFQSDEKLIKSLQHVSVVLLDTKIFLVPKIGLLREEGVPQSNIIKILRLYARSLACSTDRFMRIVEEVKELGFDPLTFQFLTAGNACLCFKKSTRAKKADVYKKWGWSDNDILAAFRKVPVCMTLSKDQIDAKLEFLVHKLGCNNPSLISKYPIVLGYSFQKRIVPRGAVLQVLLSKGLIKCKTLLVQFTLTDKDFLRRLVLCHGQEEANELLELYRSKLNQTS 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0840 975 Pfam mTERF 781 947 IPR003690 GO:0003690|GO:0006355
Lele32g0840 975 Pfam mTERF 86 307 IPR003690 GO:0003690|GO:0006355
Lele32g0840 975 Pfam mTERF 499 638 IPR003690 GO:0003690|GO:0006355
Lele32g0840 975 Pfam mTERF 709 825 IPR003690 GO:0003690|GO:0006355
Lele32g0840 975 Pfam mTERF 268 359 IPR003690 GO:0003690|GO:0006355
Lele32g0840 975 Gene3D Transcription termination factor 3, mitochondrial 167 376 IPR038538 -
Lele32g0840 975 Gene3D Transcription termination factor 3, mitochondrial 448 652 IPR038538 -
Lele32g0840 975 Gene3D Transcription termination factor 3, mitochondrial 708 960 IPR038538 -
Lele32g0840 975 PANTHER CGI-12 PROTEIN-RELATED 444 561 IPR003690 GO:0003690|GO:0006355
Lele32g0840 975 FunFam Mitochondrial transcription termination factor-like 150 370 - -
Lele32g0840 975 Coils Coil 957 975 - -
Lele32g0840 975 SMART mt_12 100 131 IPR003690 GO:0003690|GO:0006355
Lele32g0840 975 SMART mt_12 207 237 IPR003690 GO:0003690|GO:0006355
Lele32g0840 975 SMART mt_12 308 342 IPR003690 GO:0003690|GO:0006355
Lele32g0840 975 SMART mt_12 511 543 IPR003690 GO:0003690|GO:0006355
Lele32g0840 975 SMART mt_12 136 167 IPR003690 GO:0003690|GO:0006355
Lele32g0840 975 SMART mt_12 276 307 IPR003690 GO:0003690|GO:0006355
Lele32g0840 975 SMART mt_12 795 825 IPR003690 GO:0003690|GO:0006355
Lele32g0840 975 SMART mt_12 586 617 IPR003690 GO:0003690|GO:0006355
Lele32g0840 975 SMART mt_12 897 931 IPR003690 GO:0003690|GO:0006355
Lele32g0840 975 SMART mt_12 864 895 IPR003690 GO:0003690|GO:0006355
Lele32g0840 975 SMART mt_12 460 491 IPR003690 GO:0003690|GO:0006355
Lele32g0840 975 SMART mt_12 724 755 IPR003690 GO:0003690|GO:0006355
Lele32g0840 975 FunFam Mitochondrial transcription termination factor-like 738 959 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0840 Lele-ChrLele32 5585652 5593342 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele32g0840 mTERF 3e-23 No_clan