Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0830 ATGGCATCTTCCTCCTACCAACATGTCCTTACCAGCTCTCCCGATGGCCCCATCGTCGCCTTCGATGCCTCTACTGGGGCTGCCGTGACTCGCTTTGTCGGCACCCGGTCGCCCCGCTGCGGCCTCACAGTTGCCGGAAACAGCTTCATTGCCGCGTCTCATGTCTCGCCAGACACAGCGACAGTGTCCATTCACCTCTACAACTGGCACACTTCAAGCGTGCTTCACAGGTTCTCCGTTCCTGAATTTGTTGCCCCACTTGCCGCTACTCATGACGGCGGCTATATCTTCGCCGGAGGCCAGTCTGGAAGCATCCATTGTTTCTCTGTTCCTTCTGGGGATGTGCTCAAATCTTTTCATGCTCACACAAAACCCATTTCTTGTCTCCATCTCAGTAATGATGGGTCATTGGTAATTTCAGGCAGTGATGATGGCAGCATTATGGTGATTCCGACTTTTCAAATCGTTGAATCATCAGATTCAAACTCAAAAGACTTGATGATTCTTCACCATTTGAAGGCACATTCAGATTCAGTCACAGCTTTAAGCACAGGAATAAAGCTCTGCAACTCCATGCTTGTATCCTCCTCGCTAGATTCAACCTGCAAGTTCTGGAATCTTCTAGAAGGGACCCTCCTTCGGACAGTGGCCTTCCCTTGCGCCATAAATGGAGTGGCCATAGACTTATCAGACTTAAACTTCTTCGCAGCTGGATCAGATGGGTCGGTTTACAAAGCATCAATGAAGAAGGCTAAAAGCAGAAAAACACAGAACGAAGAAGAAGAAGCTCAAGAAGAACGGGTGATGAAGTGGAATAGTAAAAGCCACGTCGGTCCCACTGTATCAGTTGTTGTGGTAAATGGAGGGAGGAATCTGGTGTCTGCAGGTGAAGATGGTAGTGTGTGGATGTGGGAGATTGAAACAGAAGAAGTAACAATGGTGATAAAGGATAATAACAGTAATAATGGATTATTAATGGAAGAAGGAAGCAGTATCAGTGATATGATAGTGGTGGCAAGTAGTGGGAATGAGGGATACAATAGAGGTAGAGGGAAGAGCGGCGGCGGCTTGAGTTCAGGGCTGTTGAAAGAAGAAGTGGTGAGTTCAATGAAGAAGATAATGGAGCTTGGAGAAGTATTGAGTGTGGTGGAGGAAGATAAGAGAAGAGCCATTAAGATGCTGGAGTCTGCAATTTCTATGTATGAGAGGCTGTTGGAGCTCATACTTGAACAGGCTCTGAAAGGTGCTTGTGATGATGAAAGTAATGAAGAAGAAAAGGAAGAAGGAGAGAAAGGAGACAAGTAA 1305 0.4674 MASSSYQHVLTSSPDGPIVAFDASTGAAVTRFVGTRSPRCGLTVAGNSFIAASHVSPDTATVSIHLYNWHTSSVLHRFSVPEFVAPLAATHDGGYIFAGGQSGSIHCFSVPSGDVLKSFHAHTKPISCLHLSNDGSLVISGSDDGSIMVIPTFQIVESSDSNSKDLMILHHLKAHSDSVTALSTGIKLCNSMLVSSSLDSTCKFWNLLEGTLLRTVAFPCAINGVAIDLSDLNFFAAGSDGSVYKASMKKAKSRKTQNEEEEAQEERVMKWNSKSHVGPTVSVVVVNGGRNLVSAGEDGSVWMWEIETEEVTMVIKDNNSNNGLLMEEGSSISDMIVVASSGNEGYNRGRGKSGGGLSSGLLKEEVVSSMKKIMELGEVLSVVEEDKRRAIKMLESAISMYERLLELILEQALKGACDDESNEEEKEEGEKGDK 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0830 434 ProSitePatterns Trp-Asp (WD) repeats signature. 193 207 IPR019775 -
Lele32g0830 434 ProSiteProfiles Trp-Asp (WD) repeats profile. 273 314 IPR001680 GO:0005515
Lele32g0830 434 PANTHER WD-REPEAT PROTEIN 18 7 405 IPR045227 -
Lele32g0830 434 SMART WD40_4 112 151 IPR001680 GO:0005515
Lele32g0830 434 SMART WD40_4 71 109 IPR001680 GO:0005515
Lele32g0830 434 SMART WD40_4 165 206 IPR001680 GO:0005515
Lele32g0830 434 SMART WD40_4 264 305 IPR001680 GO:0005515
Lele32g0830 434 SMART WD40_4 209 247 IPR001680 GO:0005515
Lele32g0830 434 ProSitePatterns Trp-Asp (WD) repeats signature. 292 306 IPR019775 -
Lele32g0830 434 Pfam WD domain, G-beta repeat 114 149 IPR001680 GO:0005515
Lele32g0830 434 Pfam WD domain, G-beta repeat 169 206 IPR001680 GO:0005515
Lele32g0830 434 Coils Coil 246 266 - -
Lele32g0830 434 MobiDBLite consensus disorder prediction 415 434 - -
Lele32g0830 434 Gene3D - 2 162 IPR015943 GO:0005515
Lele32g0830 434 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 6 310 IPR011047 -
Lele32g0830 434 Gene3D - 163 346 IPR015943 GO:0005515
Lele32g0830 434 ProSiteProfiles Trp-Asp (WD) repeats profile. 119 149 IPR001680 GO:0005515
Lele32g0830 434 ProSiteProfiles Trp-Asp (WD) repeats profile. 172 215 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0830 Lele-ChrLele32 5522017 5523567 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0830 71 216 U-box Gene Family AT1G04510 28.767 4.17e-08 53.5