Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0824 ATGGAGTTACTAGCGATTCCAAGCTCTAAACTGTTGTGTGTGTTCGCATTGGGATTCTTCGCTCTGAATGTTTTCACTGAATATGGATCTAACGCGCAGAAGATACCAGACGATGAAGTGAGGGCTCTACAAGCAATATCATCAAAGATGAAGGGCTTGAATTGGAAGGTAAGCCCAAATTCTTGTATGGATGGAGGCTTCAGAAATAAGAGCATTGTAGGAGACGACATCATTAGAAATGTTACCTGCAATTGCACCTTCTCCAGTGGAAAAGCTTGCCATGTTACACATATCCAACTGAAGGGTCTCAATCTAACTGGAGTTATACCAAGTGAATTTGGTAATCTTACTCAACTCCAAGAACTTGATTTGACTCGCAACTATCTGAATGGCTCAATTCCAAAGAGTTTTGCTAACCTTCCTCTTGTTGCAATGTCCCTTCTGGCTAATCGACTCAGTGGTCTGATTCCAAAGGAAATCGGCGAAATTTCAACTTTGGAGGACCTAGTGTTGGAAAATAATCAATTAGAAGGAACTCTTCCTTCTAATCTCGGAAAATTGAAGCGGTTACGCAGATTGCTTCTTTCTGCAAATAATTTCTCAGGGACCATACCTGAAAGTTTTGGCAATCTAAAGAAACTAGAAGATTTTAGGTTAGATGGAAACAACATGTCAGGAAAATTACCCAGTTTTATTGGCAACTGGACAAATCTTGGTAGATTGGATTTGCAGGGAACATCCATGGAAGGTCCAATTCCTCAAACAATATCTTCGTTAACAAATTTGACTCAGTTATCATTCATTGGTAGAAAATATTTGAGTGATTTTAACATTGTGGAGGAAGCTGGTGGTGTTGGTAAAGGAATTTTCAGGGATTTCAATGTTGATGTGAAAGATAACACCTTGGAGATCCATTTCTACTGGGCAGGGAAAGGAACTGCAGCTATTCCTGTTAGAGGTGTATATGGACCTCTTATATCTGCTATTTCAGTAACTCCAAACTTTGAAATTCCTTCAGAAGGGCTTTCTGCTGGAGCCATTGCTGGAATTGTGGCCGGATCATGTGTGTTCCTCATACTGATATTGTTTGTCCTTTGGAAGATGGGTTTCTTATGTGGGAAAGATCCACAAGACAAAGAATTATTAGATCTTAAAACAGGTTATTTCTCTTTAAGACAAATCAAAGCTGCTACTGGTAACTTTGCCCCAGAAAATAAGATTGGTGAAGGAGGTTTTGGACCAGTGTACAAGGGTGCACTATCAGATGGTACAGTCATAGCTGTGAAGCAACTCTCCTCGAAATCAAAGCAAGGAAATCGCGAATTTGTGAATGAAATAGGAATGATTTCTGCTTTGCAACATCCGAATCTTGTGAAGCTTTATGGCTGCTGCATTGAAGGAAATCAGTTGTTGTTGATATATGAGTATTTGGAGAACAACAGTCTTGCTCGCGCTCTTTTTGGTCACCAAGAACAGAAATTACACTTGGATTGGCCTACAAGAATGAAAATCTGTGTAGGTATAGCAAGAGGATTAGCTTATCTTCACGAGGAATCGAGTGGTTATATGGCTCCTGAATATGCAATGCGAGGCTACCTGACTGATAAAGCAGATGTTTATAGCTTTGGGGTTGTCGCTTTGGAGATTGTAAGTGGTAGAAGCAACACGAATTATAGGCCAAAAGAGGAGTTTGTTTATCTTCTTGACTGGGCCTATGTCCTTGAAGAGCAAGGAAACCTTCTTGAGCTAGTGGATCCGAGTCTTGGTTCGAGCTATTCCTCAGAGGAAGCCATGAGAATGCTGAAGTTGGCACTCTTATGTACTAATCCATCTCCAACTCTCAGACCATCCATGTCCTCTGTTGTTAGTATGCTTGAAGGAAAATCGCCGATCCAAGCACCGATAATCAAGCGCCGGGAGAGCGGGCAAGATGCAAGATTCAAAGCCTTTGAGATGCTATCACAAGACAGCCAAAGCCAAACCTTTGTTTCTTCTTCTACATTCTCACAAGAAAGCATGGAGCAAAGACTTCAATCAATGGGCCCATGGGTTGATTCCTCTGTTTATCTTCCAACTAAAGATTGCTCTTCGTAA 2094 0.4097 MELLAIPSSKLLCVFALGFFALNVFTEYGSNAQKIPDDEVRALQAISSKMKGLNWKVSPNSCMDGGFRNKSIVGDDIIRNVTCNCTFSSGKACHVTHIQLKGLNLTGVIPSEFGNLTQLQELDLTRNYLNGSIPKSFANLPLVAMSLLANRLSGLIPKEIGEISTLEDLVLENNQLEGTLPSNLGKLKRLRRLLLSANNFSGTIPESFGNLKKLEDFRLDGNNMSGKLPSFIGNWTNLGRLDLQGTSMEGPIPQTISSLTNLTQLSFIGRKYLSDFNIVEEAGGVGKGIFRDFNVDVKDNTLEIHFYWAGKGTAAIPVRGVYGPLISAISVTPNFEIPSEGLSAGAIAGIVAGSCVFLILILFVLWKMGFLCGKDPQDKELLDLKTGYFSLRQIKAATGNFAPENKIGEGGFGPVYKGALSDGTVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYLENNSLARALFGHQEQKLHLDWPTRMKICVGIARGLAYLHEESSGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGRSNTNYRPKEEFVYLLDWAYVLEEQGNLLELVDPSLGSSYSSEEAMRMLKLALLCTNPSPTLRPSMSSVVSMLEGKSPIQAPIIKRRESGQDARFKAFEMLSQDSQSQTFVSSSTFSQESMEQRLQSMGPWVDSSVYLPTKDCSS 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0824 697 Pfam Leucine rich repeat 165 223 IPR001611 GO:0005515
Lele32g0824 697 Gene3D Ribonuclease Inhibitor 165 235 IPR032675 -
Lele32g0824 697 Gene3D Ribonuclease Inhibitor 41 164 IPR032675 -
Lele32g0824 697 Gene3D - 264 334 - -
Lele32g0824 697 Gene3D Transferase(Phosphotransferase) domain 1 520 634 - -
Lele32g0824 697 SUPERFAMILY L domain-like 89 271 - -
Lele32g0824 697 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53440 39 203 - -
Lele32g0824 697 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 372 476 - -
Lele32g0824 697 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 269 520 - -
Lele32g0824 697 Gene3D Phosphorylase Kinase; domain 1 373 476 - -
Lele32g0824 697 Gene3D Transferase(Phosphotransferase) domain 1 477 519 - -
Lele32g0824 697 ProSiteProfiles Protein kinase domain profile. 401 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele32g0824 697 SUPERFAMILY Protein kinase-like (PK-like) 385 626 IPR011009 -
Lele32g0824 697 Pfam Protein tyrosine and serine/threonine kinase 404 518 IPR001245 GO:0004672|GO:0006468
Lele32g0824 697 Pfam Protein tyrosine and serine/threonine kinase 522 623 IPR001245 GO:0004672|GO:0006468
Lele32g0824 697 Pfam Malectin domain 270 329 IPR021720 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0824 Lele-ChrLele32 5466311 5475625 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0824 275 696 Receptor kinase-like Gene Family AT1G53430 63.617 0.0 578
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele32g0824 PK_Tyr_Ser-Thr 2.2e-22 CL0016