Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0811 ATGGCAGGTGTTGGACCTCTTACACAGGATTGGGAGCCCGTGGTGATCCGGAAGAAGGCGCCAACAGCGGCGGCGAAGAAAGATGAGAAAGCTGTCAACGCCGCTCGTCGCTCCGGCGCCGATATTGAAACCCTAAAAAAATTTAATGCTGCGACAAATAAAGCGGCCTCCAGCAGCACTTCTTTAAACACAAAGAAGCTTGATGAAGAAACTGAGAATCTTCATCATGAACGGGTACCAACTGAATTAAAGAAAGCCATCCAGCAGGCTAGGATGGAGAAAAAGCTTACCCAGGCTCAACTAGCTCAGATGATAAATGAGAAGCCTCAAATTATTCAGGAGTATGAATCAGGTAAAGCCATTCCAAATCAACAGATATTAGGTAAACTGGAGAGAGCTCTTGGCGCAAAACTGCGGGGAAAGAAATGA 429 0.4639 MAGVGPLTQDWEPVVIRKKAPTAAAKKDEKAVNAARRSGADIETLKKFNAATNKAASSSTSLNTKKLDEETENLHHERVPTELKKAIQQARMEKKLTQAQLAQMINEKPQIIQEYESGKAIPNQQILGKLERALGAKLRGKK 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0811 142 Pfam Helix-turn-helix 87 137 IPR001387 -
Lele32g0811 142 FunFam Multiprotein bridging factor 1 71 142 - -
Lele32g0811 142 CDD HTH_XRE 85 135 IPR001387 -
Lele32g0811 142 Gene3D - 71 142 IPR010982 GO:0003677
Lele32g0811 142 Pfam Multiprotein bridging factor 1 9 79 IPR013729 -
Lele32g0811 142 MobiDBLite consensus disorder prediction 65 81 - -
Lele32g0811 142 SUPERFAMILY lambda repressor-like DNA-binding domains 81 138 IPR010982 GO:0003677
Lele32g0811 142 Coils Coil 87 107 - -
Lele32g0811 142 MobiDBLite consensus disorder prediction 51 81 - -
Lele32g0811 142 PANTHER ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 MULTIPROTEIN BRIDGING FACTOR 1 3 142 - -
Lele32g0811 142 SMART mbf_short4 86 141 IPR001387 -
Lele32g0811 142 ProSiteProfiles Cro/C1-type HTH domain profile. 87 141 IPR001387 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0811 Lele-ChrLele32 5383515 5386943 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MBF1 Lele32g0811 MBF1 6e-25 No_clan