Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0777 ATGCGCTCTCTCTTTCTGGGTGATCTTTTTACCTCGGATCCTTCGATAATTTGGTCTGATCATTTGTCTTTTCCGTCCGTTTCTTTCTCCGAATTGATTCCGGGTTCGTTATTCTCTAGTTATCCGTTTTCCTTTGTTGTCTTTCTTCCATTTCTTAAATCAGCACATTTTGACCGCATAGATGAGATGACTGATTCAGAAATGGATCAACAAAGGCGTGGGAATTCTAATTCTGAACCTTCTATCCTTGTGAGTAGTGACAATATTTTGCAGCAAAATATCCGCACAGTGGCAACAGCTTCGGGGAACATGAGTAATCTCGATTCCCACTATTTACCAGATGTCTATGACAATGCAGTAATTTATAGAGGGACACCATACAATGCCATTCAAAATCAACGCAATCTTGATATGGGTGTTGCAGCTGTGACCAACTTGAATTATTCTGGCATGAATCCTTCTTCTAGTACTGGCGTATTACCCCTCCCTGCTAATCACGGAGCCTATGATCAGTTGCCAGCATCGAGCACATTTGCTGTGTCTGGAATTTCTTTAGATAATTTCAGAATGAGTGGAACTTATGTAGATGATGTCAGAGCTTCGTTCAAAAGAAAAAATGCTGAAGCTGTTAGAGGCAATTTCCCACATTTTGATGCCTCAGCTAGTTCTTCAGTTATTCCCCCAAATGCAAGGCACTCTGATGGGGTTAGTATGATGGATACTGCTTCCTTGCCCCTGCCTCAATTCCGAGGAAATAACATTCCTTCACCCATGGCATTAGGTCCCCATGGTAGTTTGTGGAGCAGGTCAGGTGAGCCTGTTATTGTGCATGAACATGGCCATTTGATTCAAGGTAATTATTTAGGGCAGCCCTTCCAGCCAGTTGCTCCTCCTTGGTTGGACCAACAGTTGAATAACAGGCACAGTGATGTACATACTACAGCTTGGAATCAGTCTCTTCCAATGCCTTATATGCAAGCACCCAATGTTAATGGAAGTTCGTTAGAGAATGCAAATATGGGTTTGCAGAGATATCATGATACGGCCAGTAGCATAAATGGTCTCAGGTTTGTTCATCCTCCTGTCAACCAGCAGCACCATAATTATCATCATCCAGCAATGCCAATGAGAGGATTCAGAGGCCACAATATCATTTTTCAACCTCCAGTAGCTGCAGCTTCTTATAGAGTTCCAACAAATCCTTTACACAATGCCGTGATCCCTGCACAAAATGGTTTCGAGATGGGTCATAGGCATGTTGGCCTTGTACCGTCAGCAGGCCTACAGGTATATCGTCCTCATAGAGGATACATGAATGAGACAACAATTGGGCATCGAAATCTTCACCCTATGAGCTATCTCCAAGTTGATGTAGATGTTGCAATACTGGATGAAGTGGGATTAGTCGACCATCACAGAGATATGCGCTTGGACATAGAGGATATGTCTTATGAGGAGCTTCTTGCATTGGGCGAGCGAATTGGCAATGTAAGCACCGGTTTATCAGAAGGGTCCATTTCAGCTTTAATGAAAACTAGAATTTATGCAACTTCCACTATTATTAACCTGGAAGAGGAGGAAGAAACTTCAGAGGATCAGGAAACTGATTCATGCATAATATGCCAGGATAAATACGAGAACAAACAGAAGATAGGAATTCTTCAATGCGGTCATGAGTATCATGCAGATTGCTTGAAGAGATGGCTTCTTGTGAAAAATGTCTGTCCCATATGCAAATCAGAAGCATTGACTCCTGGAAAGGACAAAGGAGTATAG 1776 0.4245 MRSLFLGDLFTSDPSIIWSDHLSFPSVSFSELIPGSLFSSYPFSFVVFLPFLKSAHFDRIDEMTDSEMDQQRRGNSNSEPSILVSSDNILQQNIRTVATASGNMSNLDSHYLPDVYDNAVIYRGTPYNAIQNQRNLDMGVAAVTNLNYSGMNPSSSTGVLPLPANHGAYDQLPASSTFAVSGISLDNFRMSGTYVDDVRASFKRKNAEAVRGNFPHFDASASSSVIPPNARHSDGVSMMDTASLPLPQFRGNNIPSPMALGPHGSLWSRSGEPVIVHEHGHLIQGNYLGQPFQPVAPPWLDQQLNNRHSDVHTTAWNQSLPMPYMQAPNVNGSSLENANMGLQRYHDTASSINGLRFVHPPVNQQHHNYHHPAMPMRGFRGHNIIFQPPVAAASYRVPTNPLHNAVIPAQNGFEMGHRHVGLVPSAGLQVYRPHRGYMNETTIGHRNLHPMSYLQVDVDVAILDEVGLVDHHRDMRLDIEDMSYEELLALGERIGNVSTGLSEGSISALMKTRIYATSTIINLEEEEETSEDQETDSCIICQDKYENKQKIGILQCGHEYHADCLKRWLLVKNVCPICKSEALTPGKDKGV 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0777 591 ProSiteProfiles Zinc finger RING-type profile. 538 579 IPR001841 -
Lele32g0777 591 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 499 583 IPR013083 -
Lele32g0777 591 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 198 583 IPR045191 GO:0061630
Lele32g0777 591 SMART ring_2 538 578 IPR001841 -
Lele32g0777 591 Pfam Ring finger domain 536 579 IPR001841 -
Lele32g0777 591 SUPERFAMILY RING/U-box 537 583 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0777 Lele-ChrLele32 5106981 5111570 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0777 470 583 C3H Transcription Factor Family AT2G15530 52.632 5.04e-35 139