Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0758 ATGGAAGCCAAGATGGAGAGGAGGAGAACTTCAGTTGAGAAGGTAAGGAAGGACAACAATATAGTTGAAGAAGAAGAAGTAGAGGATGAGATAGAAGAGGAAGAAGAAAGCGGTGGTGTCGCAGAAGAGCATAAGAGGAAAGGTGTCATGGGAAGTGGAAGAAGAGGGTCAAGTGGATGTGGTGGAGTTTCTCCACCTTCCTGTCAGGCAGAGAGGTGTGGAGCTGATCTGAGTGATGCAAAGCGGTACCATCGCCGCCATAGGGTGTGTGAGTTCCACTCCAAGGCACCAGTTGTCATGGTTGCAGCGCTGAGGCAGAGGTTTTGCCAGCAATGTAGCAGGTTCCATGACTTGGGGGAATTTGATGAAGCCAAAAGAAGCTGCAGAAGACGCTTGGCTGAACACAACGAACGTCGCCGCAAAAGCACTGGTGAAGTTTACAACGAGAGCTGCAGCCGTGGCAAAGGTCCCCACACAAAGGAGAGCCATTGCAGGCATGCTGATGATAGAGGAAGAGTTCAAATGAGCGTTTCTGGGAGTTCTGGCTACAAATCTTTTCACATAAAATAA 570 0.4912 MEAKMERRRTSVEKVRKDNNIVEEEEVEDEIEEEEESGGVAEEHKRKGVMGSGRRGSSGCGGVSPPSCQAERCGADLSDAKRYHRRHRVCEFHSKAPVVMVAALRQRFCQQCSRFHDLGEFDEAKRSCRRRLAEHNERRRKSTGEVYNESCSRGKGPHTKESHCRHADDRGRVQMSVSGSSGYKSFHIK 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0758 189 FunFam Squamosa promoter-binding-like protein 14 60 129 - -
Lele32g0758 189 MobiDBLite consensus disorder prediction 133 189 - -
Lele32g0758 189 Pfam SBP domain 68 141 IPR004333 GO:0003677
Lele32g0758 189 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 46 157 IPR044817 GO:0003677
Lele32g0758 189 MobiDBLite consensus disorder prediction 1 22 - -
Lele32g0758 189 ProSiteProfiles Zinc finger SBP-type profile. 65 142 IPR004333 GO:0003677
Lele32g0758 189 Gene3D - 59 129 IPR036893 GO:0003677|GO:0005634
Lele32g0758 189 MobiDBLite consensus disorder prediction 154 172 - -
Lele32g0758 189 Coils Coil 17 37 - -
Lele32g0758 189 SUPERFAMILY SBT domain 66 146 IPR036893 GO:0003677|GO:0005634
Lele32g0758 189 MobiDBLite consensus disorder prediction 1 68 - -
Lele32g0758 189 MobiDBLite consensus disorder prediction 23 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0758 Lele-ChrLele32 4958862 4959890 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0758 53 153 SBP-box Gene Family AT1G53160 66.667 3.45e-39 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lele32g0758 SBP 2.2e-30 No_clan