Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0746 ATGATGGGTTGCTTTTGTTGTAAGCCCTCGGCCATTGATGACAGTAGGGAGAGTCCGAGGGAGCGATTATCGAATAAGGCTTCGTTGGACTCTCGCGGATCTAAGGCTACCTCATCGAGGAGGGAGGATGGATATCGAGTGAAGGATAGATATGATAATAATGATGGTAGAATTGCATCCATGGATAAACAAGGAAATGGCTCTGTTTGTTTACAAGTTGATAATTTTGAAAGGAAGAGGAAGAAAACAGAGTATGTTGTTGCACAGCATCCAGGAATTGGCAGTGTTCCAAAAGCGACAGAAGGAGAGCAGGTTGCAGCTGGGTGGCCTTCATGGTTGGCAGCAGTGGCTGGAGAGGCTATCAAGGGATGGTTGCCACGACGAGCAGATTCTTTTGAGAAGTTGGATAAAATTGGTCAAGGAACTTATAGCAATGTTTATAGGGCTCGTGATCTTGAACATAAGAAAATTGTTGCTTTGAAAAAAGTGCGGTTCGATAACCTTGAACCTGAGAGTGTTCGTTTCATGGCAAGGGAAATTCACATTCTTCGTAGGCTTGATCATCCAAACGTTATAAAACTGGAAGGTCTAGTCACATCAAGGATGTCTTGCAGCCTATACCTTGTTTTTGAGTACATGGAACATGACTTGGCTGGGCTTGCTTCACATCCTGGACTGAAGTTTACAGAAGCACAGGTCAAATGTTATATGCAGCAACTTTTACATGGACTTGATCACTGCCACGGCTTCGGTGTACTGCACCGTGACATTAAGGGATCCAACCTTCTGATTGACAACAACGGAATCTTGAAGATTGCAGACTTTGGTTTGGCAAGCTTTTATAATCCCAATCAAATTCAACCATTGACTAGCCGAGTTGTCACGCTTTGGTATCGGCCTCCAGAACTTTTGCTTGGAGCAACTTACTATGGCGCTGCAGTAGATTTATGGAGTACAGGCTGCATACTTGCTGAGCTGTATGCTGGAAAGCCTATTATGCCAGGAAGAACTGAGGTTGAACAGTTACATAAAATTTTTAAACTCTGTGGCTCACCTTCTGAGGATTATTGGAGGAAATCGAAGCTACCTCATGCAACAATATTTAAGCCTCAACAACCCTACAGGCGGTGTGTTGCAGAAACATTTAAGGAGTTTCCTGCACCTGCATTAGCACTCATGGAAACCCTTTTATCCATAGATCCTGCAGATCGCGGAACAGCAGCATTGGCTTTGAAGAGTGAGTTCTTCGCAACAAAACCCTTACCTTGTGATCCTTCAAGTTTGCCCAAGTATCCTCCGAGCAAGGAATTCGATGCCAAAGCACGGGATGAAGAAGCTAGAAGACAAGGAGCTCTTGGAAGCATGGGCCATAGACAGGTGACGAGAGAGTCTCGGGCTGTCCCGGCACCTGATGCTAATGCTGAACTGGTCCTATCCATGCAGAAGAGACAAGGTCAATCTAACTCTAAGAGCCGTAGCGAGAAGTTTAATCCTCATCCTGAAGAAGTTGCTTCAGGATTTCCCATTGATCCCCCTAGGCCATCACAGGCTGTGGAAGTAGGTATAGATCACCAAGTACAGCAACATAAAAGAGGTTCCCATTCAGGTCCACTTTGTAACCGCACTGCATGGACGAAAGCTGGGAAAAACCCGGATGATGCCCCAAAGATATCCAATGGGGGTGACTTGTCAGCAATATCTGGCTTAGTCGCAGCAAGAAGGAGCTTCTTGTCGGATGATCACAGAGAAAGGTCCGGATCATCACATGCAGAGGTTCCAAAACTAATAAGCCGGTTCCCAGGATCCTTGAAGGAGGCCTCTGAATCATTGATGCAACATGAACAGAAGCATGCTGGAGCTCCTCCTCCAAATGAAGGGAGAGGCAGCAACAAAGACCCAATTCCTGTTGGTTATGGGTCAAAGGGCCATAAAATTCATTATTCTGGCCCATTGTTAGTTCCATCTAGCAACACGGATCAGATGTTGAAGGACCACGATCGCCAGATTCAAGAAGTCGTCAGAAGAGCGCGATTGGACAAGGCGAAGATGAGAAGGCTTCAGGCCGAAGGGAACAACCAGATAACTGCCAATTCATTATTTGTTTCTGGTCGCTGA 2115 0.4577 MMGCFCCKPSAIDDSRESPRERLSNKASLDSRGSKATSSRREDGYRVKDRYDNNDGRIASMDKQGNGSVCLQVDNFERKRKKTEYVVAQHPGIGSVPKATEGEQVAAGWPSWLAAVAGEAIKGWLPRRADSFEKLDKIGQGTYSNVYRARDLEHKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHPNVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFTEAQVKCYMQQLLHGLDHCHGFGVLHRDIKGSNLLIDNNGILKIADFGLASFYNPNQIQPLTSRVVTLWYRPPELLLGATYYGAAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATIFKPQQPYRRCVAETFKEFPAPALALMETLLSIDPADRGTAALALKSEFFATKPLPCDPSSLPKYPPSKEFDAKARDEEARRQGALGSMGHRQVTRESRAVPAPDANAELVLSMQKRQGQSNSKSRSEKFNPHPEEVASGFPIDPPRPSQAVEVGIDHQVQQHKRGSHSGPLCNRTAWTKAGKNPDDAPKISNGGDLSAISGLVAARRSFLSDDHRERSGSSHAEVPKLISRFPGSLKEASESLMQHEQKHAGAPPPNEGRGSNKDPIPVGYGSKGHKIHYSGPLLVPSSNTDQMLKDHDRQIQEVVRRARLDKAKMRRLQAEGNNQITANSLFVSGR 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0746 704 FunFam probable serine/threonine-protein kinase At1g54610 215 455 - -
Lele32g0746 704 MobiDBLite consensus disorder prediction 13 63 - -
Lele32g0746 704 MobiDBLite consensus disorder prediction 13 28 - -
Lele32g0746 704 MobiDBLite consensus disorder prediction 479 493 - -
Lele32g0746 704 Gene3D Phosphorylase Kinase; domain 1 119 214 - -
Lele32g0746 704 SUPERFAMILY Protein kinase-like (PK-like) 126 424 IPR011009 -
Lele32g0746 704 FunFam probable serine/threonine-protein kinase At1g54610 119 214 - -
Lele32g0746 704 ProSitePatterns Serine/Threonine protein kinases active-site signature. 252 264 IPR008271 GO:0004672|GO:0006468
Lele32g0746 704 SMART serkin_6 132 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele32g0746 704 MobiDBLite consensus disorder prediction 422 516 - -
Lele32g0746 704 PANTHER CELL DIVISION PROTEIN KINASE 130 422 - -
Lele32g0746 704 MobiDBLite consensus disorder prediction 435 451 - -
Lele32g0746 704 ProSitePatterns Protein kinases ATP-binding region signature. 138 161 IPR017441 GO:0005524
Lele32g0746 704 MobiDBLite consensus disorder prediction 606 641 - -
Lele32g0746 704 Pfam Protein kinase domain 132 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele32g0746 704 ProSiteProfiles Protein kinase domain profile. 132 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele32g0746 704 MobiDBLite consensus disorder prediction 35 57 - -
Lele32g0746 704 Gene3D Transferase(Phosphotransferase) domain 1 215 454 - -
Lele32g0746 704 Coils Coil 669 689 - -
Lele32g0746 704 CDD STKc_CDK9_like 132 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0746 Lele-ChrLele32 4829030 4834121 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0746 124 448 Core Cell Cycle Gene Families AT5G10270 54.545 1.30e-118 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Lele32g0746 Pkinase 1.1e-66 CL0016