Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0737 ATGGAACCGGCGTGCTTTGACTGTAATGGGGGTTTCTCGAGTAAGAAGAAATTGAAATCGATTTCTTCGCAGACGGGCATAGCCGATAGGGACAATGGTTGCTTCGAGTGCAATATATGCTTGGAGTCAGCTCATGATCCTGTGGTCACTCTGTGTGGTCACCTGTATTGCTGGCCTTGCATATTCAGGTGGCTTCAAGTTCAGAACTCTTCCGATGAATCGGACGAACCACAACCTACATGCCCGGTTTGTAAAGCTGATCTCTCTCATACTTCATTAGTCCCTCTTTATGGCCGAGGTGCACATAGTTCCGATGCTGAACTCCAGAAGAAAACCCCGACAGATATAGGACTACCTCGTAGACCGCCTCCTCACAGCTCGAATGCTATGTTAAATTCTACAAGTGCGGCTACTTCTCAACCGGGTCAACTCCACCCGAGTTACTTCCAATCACAAACGCAACAGTACTTGCCTCACCTTTATAGAGGATATGCTGTTAATAGATCACCATCATATCTTGGAGTTGCAGCCCTGACTAGTTTCTCCTATCCTATTATCGATATGTTCAGGGAAACGGTCTTCGCGAGGACCTCTGGGAGTTCTGATTCTAATCCATTGGCGTATCGTAACGTTGGTTACTACCCTAATATTGGAAGTGACAGTCATAGAATGAGAAGGCAGGAAATGCTCATTGACAAGTCTCTAAGCAGAGTATCTTTCTTTCTCCTCTGTTGTGTCATTTTGTGTCTTCTCTTGTTCTGA 762 0.4567 MEPACFDCNGGFSSKKKLKSISSQTGIADRDNGCFECNICLESAHDPVVTLCGHLYCWPCIFRWLQVQNSSDESDEPQPTCPVCKADLSHTSLVPLYGRGAHSSDAELQKKTPTDIGLPRRPPPHSSNAMLNSTSAATSQPGQLHPSYFQSQTQQYLPHLYRGYAVNRSPSYLGVAALTSFSYPIIDMFRETVFARTSGSSDSNPLAYRNVGYYPNIGSDSHRMRRQEMLIDKSLSRVSFFLLCCVILCLLLF 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0737 253 ProSiteProfiles Zinc finger RING-type profile. 37 85 IPR001841 -
Lele32g0737 253 SMART ring_2 37 84 IPR001841 -
Lele32g0737 253 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED 25 250 IPR045103 GO:0005783|GO:0006511|GO:0061630
Lele32g0737 253 MobiDBLite consensus disorder prediction 103 144 - -
Lele32g0737 253 CDD RING-HC_AtRMA_like 35 86 - -
Lele32g0737 253 ProSitePatterns Zinc finger RING-type signature. 52 61 IPR017907 -
Lele32g0737 253 MobiDBLite consensus disorder prediction 126 144 - -
Lele32g0737 253 Pfam RING-type zinc-finger 37 82 IPR027370 -
Lele32g0737 253 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 9 101 IPR013083 -
Lele32g0737 253 SUPERFAMILY RING/U-box 33 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0737 Lele-ChrLele32 4768452 4769213 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0737 9 239 C3H Transcription Factor Family AT4G27470 41.176 5.91e-49 160