Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0719 ATGATTGATAAAAAAAATATTCGGAGGAGCTCGAGCGGCTGCTTCTTCTTCGATCTTATTCACCGTGTATGTGTGAGAATGGGAGTTTCAGCAACAGACCCGCTTGCCCAACTGAGTCTTCCACCGGGTTTTCGGTTTTACCCTACCGACGAGGAGCTTCTGGTTCAATATCTATGCCGGAAAGTAGCCGGCCACCATTTCTCTCTGCAGATTATTGGGGAGATCGACTTGTACAAGTGCGACCCATGGGTCTTACCGAGCAAAGCGATTTTCGGCGAGAAAGAATGGTATTTTTTCAGCCCCAGAGACCGGAAGTACCCGAATGGGTCTCGACCCAACAGAGTTGCTGGTTCTGGGTACTGGAAAGCCACCGGAACCGATAAGATCATTACCACCGAAGGCCGGAAGGTTGGAATCAAGAAAGCTCTCGTTTTCTACGTAGGCAAAGCACCCAAAGGTACCAAAACCAATTGGATCATGCACGAGTATCGTCTTCTCGGAAATTCCAGAAAGAATGGTAGCTCCAAGCTTGATGATTGGGTTCTTTGTCGAATTTACAAGAAGAACTCGAGCGCGCAGAAGAATATGCTTTCAGGCGTTTCGACCAAAGAATACAGCAACGGGTCTTCTCCGTCGGCATCGTCCCACTTGGACGATATGCTCGAATCATTGCCGGAGATCGAAGACCGAAGCTTCACCTTGCCGCGTGTGAACTCGTTCAAGGCGCTACCGCAAGACAAGAAGCTCCATTTCAATAATCTTGGCGCCGGAAATCTTATGGACTGGTTTAACCCGCCGGTACTTAACTCAGTACCTGACTTCGTTCCCGGAAGTCAGGCTCAGGGGATGGTGAATTACAACCCGGGAAATGAGTTTTATGTCCCTTCCATCTCTCATGTCTGCCACACGGAGTTGACGGCGCCGGCTGCACCGGTGGAGAAGCTTGGGAAAACATTTGAGGAGGTTCAGAGAGGGGCGATGAACCGGGTGGAGAATGTTGGCGGGTACTTTCATCAGGCGAATTCGAATGGGGGATTCTCGAACTCCATAGATCCGTATGGAATGAGTACCCCGATTGGGTTCGGATCTCAAAAATGA 1098 0.4982 MIDKKNIRRSSSGCFFFDLIHRVCVRMGVSATDPLAQLSLPPGFRFYPTDEELLVQYLCRKVAGHHFSLQIIGEIDLYKCDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRLLGNSRKNGSSKLDDWVLCRIYKKNSSAQKNMLSGVSTKEYSNGSSPSASSHLDDMLESLPEIEDRSFTLPRVNSFKALPQDKKLHFNNLGAGNLMDWFNPPVLNSVPDFVPGSQAQGMVNYNPGNEFYVPSISHVCHTELTAPAAPVEKLGKTFEEVQRGAMNRVENVGGYFHQANSNGGFSNSIDPYGMSTPIGFGSQK 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0719 365 FunFam NAC domain-containing protein 72-like 49 193 - -
Lele32g0719 365 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 39 226 - -
Lele32g0719 365 SUPERFAMILY NAC domain 35 188 IPR036093 GO:0003677|GO:0006355
Lele32g0719 365 Gene3D NAC domain 49 194 IPR036093 GO:0003677|GO:0006355
Lele32g0719 365 Pfam No apical meristem (NAM) protein 41 165 IPR003441 GO:0003677|GO:0006355
Lele32g0719 365 ProSiteProfiles NAC domain profile. 40 188 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0719 Lele-ChrLele32 4628459 4629754 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0719 27 276 NAC Transcription Factor Family AT4G27410 66.667 2.60e-119 346
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele32g0719 NAM 8e-37 No_clan