Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0707 ATGGGCACGCAGGAGCTTTTCACGCCATTTGCTTTGGCTTTTCTTCTTCTAAGCATGGGTAGTCAGTCGTCTTCCTCATTCACACCTGTGGATAACTACTTACTCGCTTGTGGTTCTTCCATTGACATAAACTTCCAGGGTCGAACTTTTCTTCCTGAATCTGTCTATTATGATAAAGGTACTTTAGAATTGAAAAGCCAGAAATCTGTTGCTGTTACCTCTCATTCTGGAGCTCCATCTCCAATCTACCAGTCAGCTACAATCTTTTGGGGCAACGCCTCATATATATTCAGAATTGGACATCCAGGTCAGCACTGGATCCGACTTTACTTCTACCCTTTCCCCAACTCTCACCAGAACTTGTCCTCTGCCTCAGTAACAGTACTCGCTGATAGTGTGGTGCTTCTCAATGATTTCACTTTCATGGATTTTGGTGGTTCTTTCTTGTTTAAGGAGTATGTAATCAATATTACATCCCCCACCTTGGTTCTCACCTTCATCCCTTCAGCAAACTCATCTGCGTTTGTTAACGCAATAGAAGTTGTCTCCACACCAGGTGATCGAGGCATTTATGCAATCAGTAAAACATCAGTTCATTTGCTTCATCTTTCAAAATTTGTCCTTGAAACCGTTTACCGGTTAAACATGGGTGATGAATCCCTCACCACTCAGAATGACGAACTTGGTCGGAACTGGGAGAGCGATGGAAAATACATGGCCTCCAATAGTAGAGCGCTGAATATTTCAGTTGATCCTCAAGATTTTGAAGATAATTCTGGATTAATACCTGTAATAGCACCAGATTGGGTCTATGCTACAGCCAAAGCCATCACAGATGCCGGAAGCTCAAATATAAGTTGGGTCTTTTCTGTAAATCCAAACAATAACTATTTTGTTCGGGTGCACTTCTGGGATATCATAAGCAACCTAGAAAATTCGATAATTTTCGACCTATTTATAGATGGCGTAGCTTATGAAACAATCGTACTTTACTATCTAGATCCTCGCCCATATATATATGGGCGACAATACATGGATTTTGTTGTCCCTACAAGAGGAAGCAATTTGACAGTAACTGTTGTTCCTTTGAGAGTGGTATATAGTAAAAATGCAATAATGAATGGGCTGGAGATAATGAAGATAATTGAAGTTAGAACTTTGGATGGACGGGCTTCTGTGAAATTACCAATAATAGTTGGTTCTATCTTCGGTGCTGCAGCCTTCCTAGTTCTCATTGCAGTAACTTTATGTTACTTGAAAACTTACAGCTCAAAGGCAAGCTCTAGAGTCACAACCAGATCATGCAGGCTTTTCACTCTACAAGAAATCAGTGAAGCAACTAACTTTTTTGACGAGGGTTTGCTTCTTGGAGAGGGTGGTTTTGGCAAGGTCTACAAAGGAATGATGATTAATGGGAAACAAGTAGCCGTCAAAGTGGCCAATCCACAATCGGGACAAGGTCTTCGTGAATTTCAGAATGAGATTGAATTGCTATCCAAGCTGTCTCATCAGAATCTGGTCTCCTTAATAGGCTATTGTGATGAAGATTCAAAAATGATTCTAGTCTATGAATTCTTGACGAATGGATCTTTAAGTGGCCATCTCTATGGGGCAGACTTTCTTCCTTTATCATGGAAGAAACGGCTAGAAATATGCATTGGGACTGCAAAGGGTCTTCATTACCTACACACAGGGGCTGCTCAAGGCAAAATCCATCGTGATGTTAAGACAGCAAATATTCTCTTGAATGAGAATTTTGATCCAAAAGTTGCTGATTTTGGAATCTCAAGAAAAGGTCCACTTCTTGATAAGAGCCATGTAACAACCCTTGTTAAGGGTAGCTTTGGTTATCTTGATCCTGAGTATTTTAGAACAAAATATCTCACAGAGAAATCAGATGTTTTCTCATTTGGGATGGTTCTGATGGAAGTTATATGCGGTAAGCCTGCTTTAGATGAGACTCGGCCAACAGAGTATCTTAATTTGGCAATATGGGCATCAAGCTGCCAAGAAAAGGGAACATTTCATGAGATTATTGACCCAAATTTGATTGGAAAAGTGAACTTAGATTCTCTAAACAAGGTAAGTGAGTTGGCTTGGAAGTGCTTGGAGGAGAGTCGCCTAAACAGACCACCAATGGGGTATGTACTATGTGAGCTTGAAGATGCTCTCCACATTGAGTTAGCTTCACCAATTCGGCAAGTTTCTGTGGATTGTGCCATTGATGTGGTCGCAGAAAATGGAATCAAGGACGAAAAGGAACAAGAATTAGCTAGAAACCTTGCTCTCTCAGTTTAG 2298 0.4073 MGTQELFTPFALAFLLLSMGSQSSSSFTPVDNYLLACGSSIDINFQGRTFLPESVYYDKGTLELKSQKSVAVTSHSGAPSPIYQSATIFWGNASYIFRIGHPGQHWIRLYFYPFPNSHQNLSSASVTVLADSVVLLNDFTFMDFGGSFLFKEYVINITSPTLVLTFIPSANSSAFVNAIEVVSTPGDRGIYAISKTSVHLLHLSKFVLETVYRLNMGDESLTTQNDELGRNWESDGKYMASNSRALNISVDPQDFEDNSGLIPVIAPDWVYATAKAITDAGSSNISWVFSVNPNNNYFVRVHFWDIISNLENSIIFDLFIDGVAYETIVLYYLDPRPYIYGRQYMDFVVPTRGSNLTVTVVPLRVVYSKNAIMNGLEIMKIIEVRTLDGRASVKLPIIVGSIFGAAAFLVLIAVTLCYLKTYSSKASSRVTTRSCRLFTLQEISEATNFFDEGLLLGEGGFGKVYKGMMINGKQVAVKVANPQSGQGLREFQNEIELLSKLSHQNLVSLIGYCDEDSKMILVYEFLTNGSLSGHLYGADFLPLSWKKRLEICIGTAKGLHYLHTGAAQGKIHRDVKTANILLNENFDPKVADFGISRKGPLLDKSHVTTLVKGSFGYLDPEYFRTKYLTEKSDVFSFGMVLMEVICGKPALDETRPTEYLNLAIWASSCQEKGTFHEIIDPNLIGKVNLDSLNKVSELAWKCLEESRLNRPPMGYVLCELEDALHIELASPIRQVSVDCAIDVVAENGIKDEKEQELARNLALSV 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0707 765 Gene3D Transferase(Phosphotransferase) domain 1 526 735 - -
Lele32g0707 765 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 188 733 - -
Lele32g0707 765 Pfam Protein tyrosine and serine/threonine kinase 455 712 IPR001245 GO:0004672|GO:0006468
Lele32g0707 765 Gene3D Phosphorylase Kinase; domain 1 414 525 - -
Lele32g0707 765 ProSiteProfiles Protein kinase domain profile. 450 728 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele32g0707 765 SMART serkin_6 450 728 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele32g0707 765 Pfam Malectin-like domain 67 381 IPR024788 -
Lele32g0707 765 FunFam Putative receptor-like protein kinase 32 185 - -
Lele32g0707 765 Gene3D - 207 382 - -
Lele32g0707 765 Gene3D - 32 185 - -
Lele32g0707 765 ProSitePatterns Protein kinases ATP-binding region signature. 456 478 IPR017441 GO:0005524
Lele32g0707 765 CDD STKc_IRAK 463 721 - -
Lele32g0707 765 SUPERFAMILY Protein kinase-like (PK-like) 424 720 IPR011009 -
Lele32g0707 765 FunFam receptor-like protein kinase FERONIA 417 525 - -
Lele32g0707 765 FunFam PTI1-like tyrosine-protein kinase 3 526 729 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0707 Lele-ChrLele32 4499806 4502103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0707 11 729 Receptor kinase-like Gene Family AT2G21480 40.845 0.0 538
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lele32g0707 Malectin_like 4.2e-23 CL0202