LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele32g0700	ATGGCGAAAAACAGGAACAAGAAGAAGAGAAATTGTGCCGTTTCTATGGATATCAGCGAGCCATCCTTTGGGGAAATTCCTCAAGCAATGGACACATCAGAGCCCGGAGCTCAAGGCCCAGTTTCTGGTGCTCCCAGCATGAAGATAAAGAAAGGAAGGCCTATGAAGAGATCAAAAAATGTCCGAAAGATGAAAGCAAGAGAAAAGGCTATATCTGCAAGTGAGAAGACCGCTGAGAAAATATTGAAGAACGAAAGCAAAAAATTAAAAGTTCAATCTGCCAAAACACTAGTCCCCATTTGGTCGTTGAGTAAGAGGGAAATTGAAGTGACTGAGAAAGAAAATATGAGTTTTGGTGTAAGCTACTATGGAAGTCATGGTCTTCCGTCTTTTAGAATATCTAACTGCAATATTGACAGAGATAGCCGTAACGGTAAGTATATAAAATTCTTTGGTTTCATTTTGCGCTTCCGCTTTGATAGTAACCTTTGGGTAGCCGATCTTTGTCTACGTAGCATTCAGCATAATCCGCAGTTCTTCTCCTTGTTTGTTTGTTTTGTTCCCATTAACCCGCACAAGAAACTTTCCAAGCCTGAGAATATTTTCCCATCAAGTTGGAAAGTTGATAGCGCCAGCATAATGGCTGCCATAGGTTCCGTGGCAATGGCCAACTTGATTGCCCCAGTTGCTGCGAAGGCTGAAGTGGTTGATTCCGTTTATGCGATAGCTGATGGAAGCTTGGGTGATTGGTTTGGTGGCTTGCTATATTCAGCTGGACAACAGGCCAACGTAGCTGTTCAAGACCAACTAGCTTCTCTCAGCTTCACCAGTTTAGCAGTAATTTATGGGGCAGGGCTTGTTACCAGCCTTTCACCCTGTACACTAAGTGTCTTACCACTAACTCTTGGTTACATTGGGGCATTTGGGTCTGGCAAAAGTAGGGCAGAGATTATTGGTGATTCTGTGTCATTTTCTTTGGGTCTTGCCACCACATTAGCACTGCTGGGTGTAGCTGCATCAGTTGCTGGAAAGGCTTATGGACAGATAGGCCAAGGACTACCTTTGGCTGCTTCTGGTTTGGCAGTAGTTATGGGTTTAAACCTTCTTGAGATCATTGAATTAAAACTTCCCTCATTTTTTGACAATTTTGATCCACGTGCAGCTGCTGCCAATTTACCATCGAGTGTGCAAGCATATCTAGCTGGGCTTACGTTTGCTCTAGCTGCCTCACCCTGTAGTACACCTGTGCTGGCTACTATTCTGGGATATGTTGCTGCGTCAAAGGATCCAGTGATTGGAGGTAGCTTACTTTTGACATACACAACTGGTTATATTTCTCCTTTACTCTTAGCTGCTTCTTTCGCTGGAGCATTGCAGAGCCTGCTTTCATTCCGCAAGTTCTCAGCATGGATCAATCCTATGAGTGGAGCACTTCTGTTAGGAGGGGGTCTATACACTTTCTTGGATAGGCTATTCCCAACAACAATGGTGATGTAG	1497	0.4395	MAKNRNKKKRNCAVSMDISEPSFGEIPQAMDTSEPGAQGPVSGAPSMKIKKGRPMKRSKNVRKMKAREKAISASEKTAEKILKNESKKLKVQSAKTLVPIWSLSKREIEVTEKENMSFGVSYYGSHGLPSFRISNCNIDRDSRNGKYIKFFGFILRFRFDSNLWVADLCLRSIQHNPQFFSLFVCFVPINPHKKLSKPENIFPSSWKVDSASIMAAIGSVAMANLIAPVAAKAEVVDSVYAIADGSLGDWFGGLLYSAGQQANVAVQDQLASLSFTSLAVIYGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAEIIGDSVSFSLGLATTLALLGVAASVAGKAYGQIGQGLPLAASGLAVVMGLNLLEIIELKLPSFFDNFDPRAAAANLPSSVQAYLAGLTFALAASPCSTPVLATILGYVAASKDPVIGGSLLLTYTTGYISPLLLAASFAGALQSLLSFRKFSAWINPMSGALLLGGGLYTFLDRLFPTTMVM	498

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele32g0700	498	MobiDBLite	consensus disorder prediction	1	70	-	-
	Lele32g0700	498	PANTHER	CYTOCHROME C-TYPE BIOGENESIS PROTEIN HI_1454-RELATED	272	497	-	-
	Lele32g0700	498	MobiDBLite	consensus disorder prediction	50	64	-	-
	Lele32g0700	498	Pfam	Cytochrome C biogenesis protein transmembrane region	282	488	IPR003834	GO:0016020\|GO:0017004

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele32g0700	Lele-ChrLele32	4454420	4462736	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele32g0700	186	498	Chloroplast and Mitochondria Gene Families	AT5G54290	72.783	2.78e-138	401