Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0685 ATGGCAGAGAAGCAACGCAATTACTGTGTGAAGAAGAGGGTCAAAATTAAGATTCGGTATATTTATCATACGGTACGGAGGAGAGGGAGCGATAGAGGAAGAGCAAGAGCAAGAGAAGAAGAAGAAGAAGTAGAAATGGAGGTTTGCGCGCTGTGCGGGAAGAAGGCGAGGATGTACTGTGAATCGGACCAGGCTAAGTTATGCTGGGACTGCGACGACAAGGTTCACGGCGCCAACTTTCTGGTGGCGAAGCACACCAGGGTTCTTCTCTGCCGGACCTGTCAGTCTTTCACTCCATGGAAAGCATGTGGTCCCAATCTCACACGGACTCACTCTCTCTGCCACCACTGTGCGACCGATTCACACAATCATCAACAGGAAGAAGATGATCGTGACGATCATCATCATGATCTACGTGATAGTCCTGATCTCGACGAGGAAGAGGAGGAGGATGGAGATTCTAGTTCCGATGCGGACTCTGGTTATGAAGATGATGACGAAGAAGACGAGGGAGAGGAGGAGGATGAAGGAGAGAACCAGGTGGTTCCATGGTCTTGCGATTCTGCTTCGGTGCCATCGCCGCCTCTTGCGAGCTCTGTCTCAGCTGGTTCTGATTTAGCCTGGAAGCGGCGGCGAGCGAGTTTGGTTGTCGATTCCGATGATGAGATCGGATGTTCTTCATCTGAAATGCCCTCTGCCTCGCAACTACCAGACGATGATCCATCTTCTTGGAATATTCTCAGGCCATGGAAGCATCCTAGAACCACTCAGCAGAGCCAATAA 783 0.507 MAEKQRNYCVKKRVKIKIRYIYHTVRRRGSDRGRARAREEEEEVEMEVCALCGKKARMYCESDQAKLCWDCDDKVHGANFLVAKHTRVLLCRTCQSFTPWKACGPNLTRTHSLCHHCATDSHNHQQEEDDRDDHHHDLRDSPDLDEEEEEDGDSSSDADSGYEDDDEEDEGEEEDEGENQVVPWSCDSASVPSPPLASSVSAGSDLAWKRRRASLVVDSDDEIGCSSSEMPSASQLPDDDPSSWNILRPWKHPRTTQQSQ 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0685 260 ProSiteProfiles Zinc finger B-box type profile. 44 90 IPR000315 GO:0008270
Lele32g0685 260 MobiDBLite consensus disorder prediction 143 180 - -
Lele32g0685 260 CDD Bbox1_BBX-like 49 90 - -
Lele32g0685 260 MobiDBLite consensus disorder prediction 124 142 - -
Lele32g0685 260 Gene3D Classic Zinc Finger 29 79 - -
Lele32g0685 260 Pfam B-box zinc finger 45 89 IPR000315 GO:0008270
Lele32g0685 260 MobiDBLite consensus disorder prediction 124 260 - -
Lele32g0685 260 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 47 245 - -
Lele32g0685 260 MobiDBLite consensus disorder prediction 225 241 - -
Lele32g0685 260 SMART bboxneu5 44 90 IPR000315 GO:0008270
Lele32g0685 260 MobiDBLite consensus disorder prediction 183 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0685 Lele-ChrLele32 4348317 4349259 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0685 49 229 C2C2-CO-like Transcription Factor Family AT4G27310 42.500 7.32e-33 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele32g0685 zf-B_box 1.8e-08 No_clan