Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0679 ATGGCAATCCTTCTTCACTGTGTGCCACTTCTATTTTTCAACATGCTTTTATTCTTCTCTCCATTAATATTGGCCTCTGCAACTGCAACCGACATCATTGCACAATCTCAGGCTCTTATTGATGACGGAAAATCCACCTTGGTCTCTAAAGATGGAAGATTTGAACTGGGTTTTTTCAGCCCAGGTGGTTCCACAAACCGCTACGTTGGTCTCTGGTACAAACAAGTCCCAGTTAGATATATTCTTTGGGTCGCCAACAGCGAGAAACCACTCAAAGACAAGCTGGGCATCATGACTATAAACAAAGAAGGACAACTTGTGATTCTCAGCCAAAATCAAACTCTTGTTTGGGTCGCTACAAACTCCACAAAGGCCTTGAATATGATTCCTATTGTTCAGCTTTTAGATTCTGGAAACTTGGCGCTAAGAGAAGAGAACGACCAAAATCCAGATAACTACTTGTGGCAAAGCTTTGACCATCTCACTAATGTATTTTTGCCAGAAATGAAGCTTGGATGGGACTCGAGAACCGGTATGAACCGGAAGTTAATAGCATGGAAGAATTGGGATGACCCAACTCCAGGAGATTTCTCATGTGAACTCATGCTTCATAGTTACCCAGAAATAATTACTTGGCAAGGTAGAACAAAATATTACAGAAGTGGCCCTTGGAATGGTGATCATTTTGTTGATGCTCCTTCATCAAATAAGAGTTTGCTTTACAATCAAACGTTTGTGAACAGCAAAGATGAGGTTTATTACATGTATGTTCCATTAAATGAGTCAATGATCTCCATAAGAGTCTTGAACCAGACAAGAAACTCTCTGCAGAATCTCATGTGGATTGAAGAAGATCAAAGTTGGAAATCTTTTGGTGATGTTCCAAGAGACAATTGTGGAAGATATAATCTTTGTGGTGCTTTTGGGATTTGTGCCATCGTTGACTCAACGTTATGTCAATGCCTGAGAGGATTTGAGCCAAAATCACCTAAGAATTGGGACATATATGACTGGAAAGAAGGGTGTGTTCGGAGTGAACCATGGAGTTGTAAGGTTAAAAACAAAGACAACTTTGTTAAATTTAGGAACCTTAAATTACCAGATACTACACATACTTGGGTTAATACAAGTATGACACTTGATGAGTGCAAAGCAAAATGTTGGGAAAATTGTTCTTGTACTGCTTATTCTAATTTTGATACTATAGGAGGAGGTAGTGGCTGTGTTATGTGGTTTGGTGATTTACTTGATTTGAATCAAATGTCAAATGATGCTGGCCAAGATCTTTATATTCGCCTTGCTTCTACTGATATAGGTGCTAATTCATACAAGATAAAAGTAACTGCGATAACAGCTACTTTTTTTGCACTTGGGATGCTTTTGAGCTTACTCTATATTTATAAGAGCACAAGATCAAAGTCCAAAGAAAACGCTGATGAAGTTCCTGAAGGAGATACGGAACTTCCTCTCTATGACTTTGCTATAATAGCTAGTGCTACCCAGAACTTCTCAGATGACAATAAGCTTGGCCAAGGTGGTTTTGGACCTGTATATAAGGTTCTTCTACCCAAAGGAAACTCTTATGTTGATTTTGGTTTAGCAAAGACATTTGGAAAAGATGAAAATGAAGAAAATACAAGGAGAATTATCGGTACATATGGTTACATGGCACCTGAATACGCAATCTACGGATTATTCTCTATGAAATCTGACGTATTCAGCTTTGGAATTCTATTACTAGAGACAATGAGTGGAAAGAAAAATGGAGCATTCACGTTGTCAAACCAGAATGTTAACCTTATTGGGCATGCATGGAGGTTGTGGAAGGAGGGAAGGCTACTTGAATTGATTGACGCAAATTTGGGAGAATCATATAATGAATCAGAAGTATTGAGATGCATTCATATTGGTCTTCTTTGTGTGCAACATCATCCTGATGATAGGCCAAACATGTCATCTGTGGTTGTGATGTTGAGCAGTGAGGGTGATTTGCCTCAACCTAAAGAGCCTGGTTTCCTCATAGAAACCATTCATATTAGTAAATTTGGCAATCACAATTCAGCTTCGGTAAATGAAACTTATATCACCCAGAATTTCCTCGAACTGAGGCAGCGAAATCTGCTAATGGCTGATCCTATTACGGCCTTACCCATTCTCTACGGTGAAGGAAAGGGCACAATTTTTCTGACTTCAAAGCACCATGTCAACCCACATGCTTCTGCTGGTCTGCCCTTTCAACATGTGCCACATCAGGATCAGGGATTTTCTTTTGCAACAGATACCCTTGCCCAGTTCGAGTCTCTTCTTGGTGGCCAGACCTTGGTTTCTGAAAATGAAATGTTTGAATTGGGTTTCTTCAGCCCAGGTAGCTCCACAGACCGCTATGTTGGAATCTGGTACCACAACATCCCAGGTAGAACTGCTGTTTGGGTTGCCAACCGTGACAGAGCCATAAAAAACAACTTTGGCATGTTGAGCATAAACACAGAGGGACATCTTGTGCTTCTCAGCAAGGATGAGACTGTTGTTTGGTCGGCAAATTCCACCACAAAGGCCTTGAGTCCAATTTTGCAGATTTTAGGCTCTGGAAACTTGGTTCTAAGAGATGGGAAAGATCAAAATCCCCAAAACTACTTGTGGCAAAGCTTTGACTATCCTTCTGATACAGTTTTGCCAGGAATGAAGATTGGATGGGACCTGAGAACCGGTCTAAATCGGCGTTATGCAGCATGGAAGAATTGGGATGACCCTTCCTTTGGAGACTTTACAGATGAGCTTGTACTTCACAATTATCCTGATTTAGTAATCTGGCAGGGCCTAACAGAGTATATAAGGATTGGCCCCTGGAATGGTGTCCGGTTCAGTGGCGTCTCTCATGCGACGACCAATCCACTGTATGAAGTAAAGTTTATCTGGAATAAAGATGAGGTGTATGCAGCTTATAATGTGAAAAATAAGTCACTGATTACAAGATTTGTCTTAAACCAAACATTATACTCAGTACTGGACTTAATATGGATTGAAGATGATCAAAGGTGGATTACATTTAGTTTTGCTCCAATTGATAATTGCGAGAGATATAATCGTTGCGGCCCAAATGGAAACTGCATCGTGGGTGATACACCAATATGCCAGTGCTTGATAGGATTCTTGCCCAAATCACCCAAAACTTGGAACGCGATGGACTGGTCTGATGGATGCGTCCGCAATAAATCATGGAGTTGCAAGAAAAAAAGCAGGGATTATTTTGTCAAATTTAGTGGGCTGAAATTGCCAGATACTACATACTCTTGGGTTAATGCAAGCTGA 3309 0.4044 MAILLHCVPLLFFNMLLFFSPLILASATATDIIAQSQALIDDGKSTLVSKDGRFELGFFSPGGSTNRYVGLWYKQVPVRYILWVANSEKPLKDKLGIMTINKEGQLVILSQNQTLVWVATNSTKALNMIPIVQLLDSGNLALREENDQNPDNYLWQSFDHLTNVFLPEMKLGWDSRTGMNRKLIAWKNWDDPTPGDFSCELMLHSYPEIITWQGRTKYYRSGPWNGDHFVDAPSSNKSLLYNQTFVNSKDEVYYMYVPLNESMISIRVLNQTRNSLQNLMWIEEDQSWKSFGDVPRDNCGRYNLCGAFGICAIVDSTLCQCLRGFEPKSPKNWDIYDWKEGCVRSEPWSCKVKNKDNFVKFRNLKLPDTTHTWVNTSMTLDECKAKCWENCSCTAYSNFDTIGGGSGCVMWFGDLLDLNQMSNDAGQDLYIRLASTDIGANSYKIKVTAITATFFALGMLLSLLYIYKSTRSKSKENADEVPEGDTELPLYDFAIIASATQNFSDDNKLGQGGFGPVYKVLLPKGNSYVDFGLAKTFGKDENEENTRRIIGTYGYMAPEYAIYGLFSMKSDVFSFGILLLETMSGKKNGAFTLSNQNVNLIGHAWRLWKEGRLLELIDANLGESYNESEVLRCIHIGLLCVQHHPDDRPNMSSVVVMLSSEGDLPQPKEPGFLIETIHISKFGNHNSASVNETYITQNFLELRQRNLLMADPITALPILYGEGKGTIFLTSKHHVNPHASAGLPFQHVPHQDQGFSFATDTLAQFESLLGGQTLVSENEMFELGFFSPGSSTDRYVGIWYHNIPGRTAVWVANRDRAIKNNFGMLSINTEGHLVLLSKDETVVWSANSTTKALSPILQILGSGNLVLRDGKDQNPQNYLWQSFDYPSDTVLPGMKIGWDLRTGLNRRYAAWKNWDDPSFGDFTDELVLHNYPDLVIWQGLTEYIRIGPWNGVRFSGVSHATTNPLYEVKFIWNKDEVYAAYNVKNKSLITRFVLNQTLYSVLDLIWIEDDQRWITFSFAPIDNCERYNRCGPNGNCIVGDTPICQCLIGFLPKSPKTWNAMDWSDGCVRNKSWSCKKKSRDYFVKFSGLKLPDTTYSWVNAS 1102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0679 1102 Pfam S-locus glycoprotein domain 219 329 IPR000858 GO:0048544
Lele32g0679 1102 Pfam S-locus glycoprotein domain 945 1054 IPR000858 GO:0048544
Lele32g0679 1102 FunFam Os04g0303100 protein 799 943 - -
Lele32g0679 1102 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 537 663 - -
Lele32g0679 1102 CDD B_lectin 766 886 IPR001480 -
Lele32g0679 1102 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 26 158 - -
Lele32g0679 1102 ProSiteProfiles PAN/Apple domain profile. 350 434 IPR003609 -
Lele32g0679 1102 ProSiteProfiles Bulb-type lectin domain profile. 759 880 IPR001480 -
Lele32g0679 1102 Gene3D Transferase(Phosphotransferase) domain 1 520 666 - -
Lele32g0679 1102 SUPERFAMILY alpha-D-mannose-specific plant lectins 808 917 IPR036426 -
Lele32g0679 1102 Gene3D - 25 159 IPR036426 -
Lele32g0679 1102 Gene3D - 755 883 IPR036426 -
Lele32g0679 1102 Pfam PAN-like domain 350 418 IPR003609 -
Lele32g0679 1102 ProSiteProfiles EGF-like domain profile. 1020 1056 IPR000742 -
Lele32g0679 1102 Pfam Protein tyrosine and serine/threonine kinase 530 657 IPR001245 GO:0004672|GO:0006468
Lele32g0679 1102 CDD B_lectin 43 160 IPR001480 -
Lele32g0679 1102 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 16 649 - -
Lele32g0679 1102 CDD EGF_CA 1021 1050 - -
Lele32g0679 1102 Gene3D Hepatocyte Growth Factor 349 436 - -
Lele32g0679 1102 ProSiteProfiles Protein kinase domain profile. 297 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele32g0679 1102 SMART blect_4 38 161 IPR001480 -
Lele32g0679 1102 SMART blect_4 765 886 IPR001480 -
Lele32g0679 1102 ProSiteProfiles Bulb-type lectin domain profile. 30 155 IPR001480 -
Lele32g0679 1102 CDD PAN_AP_plant 349 434 - -
Lele32g0679 1102 FunFam Os04g0303100 protein 71 218 - -
Lele32g0679 1102 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 192 IPR036426 -
Lele32g0679 1102 SMART ntp_6 353 433 IPR003609 -
Lele32g0679 1102 Pfam D-mannose binding lectin 81 187 IPR001480 -
Lele32g0679 1102 Pfam D-mannose binding lectin 807 912 IPR001480 -
Lele32g0679 1102 SUPERFAMILY Protein kinase-like (PK-like) 530 661 IPR011009 -
Lele32g0679 1102 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 755 883 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0679 Lele-ChrLele32 4308239 4315746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0679 529 676 Receptor kinase-like Gene Family AT4G23150 53.691 3.50e-49 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele32g0679 PK_Tyr_Ser-Thr 1.3e-11 CL0016