Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0669 ATGGCGGATGATGAATTTCAAGCAACTGGAAACTGGTGGGACTCATCTTCAAGAAATGTGAGATTCGAAACTGGTCCTTCCCACTCATCTTCCTTCCCCAATAACTTCACTAATTGGCAACAAATAGATCATCATCACGATCTCAAGCCTTCCATCTCTGATTCTCCCCCCATGATCATGGGCTTAGGCCTCTCCTCAAACCCCATCGACTGGAACAATCATAATCATCTTCTTAGAGCAGAAGAGAAGGGTGTCGTCTCCGATGGCCGATTCAGATCCACGTTTCAAGAGAATAATAATAATAATCTGAGTTCTTCAGGAGGAAGCAGTAATTTTCATCAGCAAGTTGAGTGGAGAGAGAAGCTTTTGTTTTCAACTGACTCGTCTTCAACTACCACCACTGATAATAATAATCAGTACAGCACTACTTCTGGAGATAGTATAGTGACTACAAGCCATGGCTTAGCTTCTAGTTTCCAACACATGGATTCTTCTGCGAATCCTTCATTATTACAGGGATTCTTATTAGCTCCTGAAGCTTCTTCTTCTTCTTCCTCCTTCGACAATAATAATCATCATCATAATCGATCTTGCTTCAACTTTCCCTATAATAATGATCAGTTAATGCCTTCTTGGCCTAAGGTTTCTCAGTTTCTTAGGGCTTCTAATTCGCCGCCCAAACAAACACAAAATCACGGCGGCAACTGCGGCGGCGGTAATAGCCAATTGCAGTTTACGAACAACGCATCTTTCTGGAACGCTTCTGAAGCTAATCATCATCATCATGCCGCCATTAAAGAAGCTACTCGACCTTCCTTCTTCCCTAATTCCTTGCAGCCTCCTTTTCATCACTCGCCGAATTTTGATGCACAATCAAAGAATATTTGTGGAGGAAGAGAAACGAGTAGTGTGGGGAAGAAAAGTGGTGGAGAGACCGCACCAAAAAGGGCTAGAAACGAAACCTCATCGACTTTGCCACCTTTTAAGGCGAGAAAAGAGAAGATGGGGGACCGAATTACTGCTCTTCAACAGTTGGTTTCGCCTTTCGGGAAGACTGATACAGCCTCAGTGCTCTCTGAAGCCATTGAGTATATCAAATTCCTCCACGAACAAGTCTCTGTTTTAAGCACCCCATATATGAAAAGTGGAGCTCCATTACAGCACCAACAGATTTCTGGTAAATGTAAGGAAGGAGGTGAAGCCCTAATAAACCAAGACCTGAGAAGCCGAGGGCTGTGTTTAGTGCCAGTTTCAAGTACTTTTCCAGTCGCTCATGAAACCACTGTTGATTTTTGGATGCCAACTTTTGGAGCCAGTTTCAGATAA 1326 0.4329 MADDEFQATGNWWDSSSRNVRFETGPSHSSSFPNNFTNWQQIDHHHDLKPSISDSPPMIMGLGLSSNPIDWNNHNHLLRAEEKGVVSDGRFRSTFQENNNNNLSSSGGSSNFHQQVEWREKLLFSTDSSSTTTTDNNNQYSTTSGDSIVTTSHGLASSFQHMDSSANPSLLQGFLLAPEASSSSSSFDNNNHHHNRSCFNFPYNNDQLMPSWPKVSQFLRASNSPPKQTQNHGGNCGGGNSQLQFTNNASFWNASEANHHHHAAIKEATRPSFFPNSLQPPFHHSPNFDAQSKNICGGRETSSVGKKSGGETAPKRARNETSSTLPPFKARKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVSVLSTPYMKSGAPLQHQQISGKCKEGGEALINQDLRSRGLCLVPVSSTFPVAHETTVDFWMPTFGASFR 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0669 441 Gene3D - 329 390 IPR036638 GO:0046983
Lele32g0669 441 MobiDBLite consensus disorder prediction 221 242 - -
Lele32g0669 441 CDD bHLH_AtbHLH_like 325 376 IPR045239 -
Lele32g0669 441 MobiDBLite consensus disorder prediction 272 329 - -
Lele32g0669 441 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 329 384 IPR036638 GO:0046983
Lele32g0669 441 SMART finulus 329 374 IPR011598 GO:0046983
Lele32g0669 441 MobiDBLite consensus disorder prediction 272 308 - -
Lele32g0669 441 MobiDBLite consensus disorder prediction 127 147 - -
Lele32g0669 441 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 319 368 IPR011598 GO:0046983
Lele32g0669 441 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 140 422 - -
Lele32g0669 441 FunFam Transcription factor bHLH123 family 329 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0669 Lele-ChrLele32 4247020 4249638 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0669 243 441 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 61.881 8.63e-69 222