Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0659 ATGCGTGCCTCCAACGCTAGAAACCTTTGTACACTGAGTGGTCTTCTCCGTTCTTCAACCTTGAAACTCGAGACTTCTAAGCCCCAATCCCATCCTGTAGTTTCATCCATTTATGAAGATGATTTTTCTGACCTCGATGGTGATGCTCACTCAACCCGCAATGCTCTCGAGTTTGAGCGACCCGCTGATTCAGCGAATTTGCCTGACCTGGTATCTAAGCAGATTTCTACTATGTTGTCTGATCAAAAGAAACTTCCAAGAGGTCAAGCTCGAAAGCTTGCAAAATTTAAATCTTCTACTCTACATTCATCCATTTTGAAAGACGATTTTTCAGAACATGGTAGTGATCCTAAGCTTAAAGGCTTCAAGGACCTTGACCATGCGCCACTCTCTCGTTCAGAGAATTCACCTAATTCGGTATCTAAGAAGATTCCTTCTGTGTTGTGCAAATCTGATGGAGCAGAGAAAAAGCTTTCAAGAGGTCAAATTCGCCACTCTACAATAATGGAATCTTCTTCTCAAGCCTCGTCCATTCTGGAAGATGATTTTTCAGAACTTGACAGTGAACATAATCCTTCAAGCCGAGAAGACCTTGACTTTGTACAACCCTGTGTTTCAGAGAATTCACCTAATCTCTACACTGAGCAGATTAGTGATATACTGTGTGATGGTCAGTTGGTCAGGAGATCAGGAGATGATGTAGAAAAATTGGAAATTGCACTAGATTTACCATGGATACTTGACCCATTTGGTGGGAATACATCGCAGCGACAGAAAGAGAAGACCCGTGACAGGAAGCAAAGGTGGATTTTTAAACACTCGCAGGAAAACCGCTTTGATAGGGTAGTTAAATTCTGTGCAGATAAACTGGGTACAAAGGCTACCGTGGAAGTGTTAGGTAAATTGGGAAGAGAAACAGGCATGAAAGAATACAATGCATTAATAGAAGTATGCATAAATAATGCCAGGAAAACCAATGATGAAGAAGTGGCAATTGAAGAAATGAGCAAGGCTTTTCGCCTCTTTAGAGAAATGAGAGAACAAGGTTATGAACTACAAGAGCAAAGTTATAGCCCTCTTCTTGTATATTTAATTGATATGGGTATGGTTGAAGAATTTCAATTATTCAGTGAGGTAATCAAAGATGAGAATCCCAGTTCAGTTTCAAGGTTGGGTTACTATGAAATGATGTTATGGCTTAGAGTTGACAACCAAGAAAAGATTCAGGATCTTTGTAACTCTATTGCAGTCAATGATGGTATTGACTCCTCTGGTTTAGGAGAAAGTTATTTATTGGCATTTTGTGAAAGTGATTGGAAAGAGGGGCTTTTACAGCTGTTGGAAATTATGGACATAACAAAACTTCCATCTACAGAATTTGTAGCAAGTATTTTTAGATCATTGGGAAGGCTATGCTTGGAATCATATGCAGAAAAGTTCCTTTTAGCTTTCAAAATTTTCGATGATGAAGCAAATAATGTTACAAACTTCATTGCCAGTTATGCTGTTAGCCTACCAAATTTTGCGGTTGAGGATGCCATATTGAAATTCAAGGATTTGCACCAACAACTGGAAGTTTCACCTTCATCCTCATCATACGAGAAGCTCATTATGTATGCCTGTGACTCACTTGAGGTGCATTTAGCGCTTAAGATTGTTTGTGAAATGTGTGAAGCAGGCCTTACCTTATCTACTGAGGTGTTAAGCTCCATATTACGAAGTGTTGAAGAAACATGTGAATATAATTTGGTCCACGCGATCTATTCCATAATATCTCACTACAGTTTGAAGGCAAATTGTGAAACATTCAGGTGTATGATAAACTTGTGCATCAGGATGAAAGATTTTGAAAGTGCAGATAAGATGCTTGGTGATTTGGAAGAAATGAATATGAAGCCTACGTCTAGCATGTACAATGCTATTATGGGTGGATATTTTAGAGAGAAGAACGTTAATGATGCTTTGAGGGTCCTTGAGCGCATGAAAGATGCCAACATCAAACCTGATTCAGGTACTTTCAACCATTTGATCGGCAACTCTAAAACTGAGGAGGATATAACCAAGTATTATGAAGAAATGAAGCAGTCTAACTGCCAGCTTACAAAGCAGACTTTCATGGCCCTTATAACTGCATATGCAGCCTGTGGACAGTTGGAGAAGGCAAAACAGGTGGTCTTAGATCCAGCCATTCCTGTAAAGAGCTTAAATGAAATCAAAGGTGCTCTTCTCTCAACCCTTGCATTACATGGGCAATTGTCGGATTCTATTCATATTTACGAGGAAATCAAGGAATCTGGAAACAATCTGGAGGCAAAAGCTGTTATAAGTCTTATTGAGGGACACATCAAATCTGATGGGGAGTTGGATAGATTGTTTGTGCTACTTAAAGAATTGACTGATCCAGACTATTGGGTAGATGGTTGCTTTAGAATTATTATGTTGTGTGTTGAGAACAAGCATTTAAGTTCTGCTGTTGACTTGATCAAGCAACTCAATGATAAAATTCAGGATAACGAACTACTCATGGAAGTTCTCTTGGATCAGGTGTTTTCTACAATTGCATCTTCAGAGTCCACACATTTGGAGTTTGGCCTAGAGCTTTATTGGCTGATCAGGAAAGTGCTTGGCATTGTGCCTTCACGGCAATGTCTGGACTTTCTTCTAACTGCTTGTGCCAATGCCAAAGATTTGCGGAATATTCGTAAAATTTGGAAAGAGTACCAGGTTGCCGGATACCCTTTTAATGTTTTAAGCTACGTGAGGATGTATCGAGCTCTTTTGGTTGCAGAAGATTGTAGATCTGCCCGTTTTATACTCAAGAAAATTCCAAGAGATGATCCCGATGTTCGTCGTGTCGTCAAAGAATGTCAAAAAACATATGATGATCTTGCTTCCTTGGATAAACTTATAAAGAAAATGGATAAGAAAGAAAAGGAGGAAGAGTTATTTGATTGA 2955 0.3926 MRASNARNLCTLSGLLRSSTLKLETSKPQSHPVVSSIYEDDFSDLDGDAHSTRNALEFERPADSANLPDLVSKQISTMLSDQKKLPRGQARKLAKFKSSTLHSSILKDDFSEHGSDPKLKGFKDLDHAPLSRSENSPNSVSKKIPSVLCKSDGAEKKLSRGQIRHSTIMESSSQASSILEDDFSELDSEHNPSSREDLDFVQPCVSENSPNLYTEQISDILCDGQLVRRSGDDVEKLEIALDLPWILDPFGGNTSQRQKEKTRDRKQRWIFKHSQENRFDRVVKFCADKLGTKATVEVLGKLGRETGMKEYNALIEVCINNARKTNDEEVAIEEMSKAFRLFREMREQGYELQEQSYSPLLVYLIDMGMVEEFQLFSEVIKDENPSSVSRLGYYEMMLWLRVDNQEKIQDLCNSIAVNDGIDSSGLGESYLLAFCESDWKEGLLQLLEIMDITKLPSTEFVASIFRSLGRLCLESYAEKFLLAFKIFDDEANNVTNFIASYAVSLPNFAVEDAILKFKDLHQQLEVSPSSSSYEKLIMYACDSLEVHLALKIVCEMCEAGLTLSTEVLSSILRSVEETCEYNLVHAIYSIISHYSLKANCETFRCMINLCIRMKDFESADKMLGDLEEMNMKPTSSMYNAIMGGYFREKNVNDALRVLERMKDANIKPDSGTFNHLIGNSKTEEDITKYYEEMKQSNCQLTKQTFMALITAYAACGQLEKAKQVVLDPAIPVKSLNEIKGALLSTLALHGQLSDSIHIYEEIKESGNNLEAKAVISLIEGHIKSDGELDRLFVLLKELTDPDYWVDGCFRIIMLCVENKHLSSAVDLIKQLNDKIQDNELLMEVLLDQVFSTIASSESTHLEFGLELYWLIRKVLGIVPSRQCLDFLLTACANAKDLRNIRKIWKEYQVAGYPFNVLSYVRMYRALLVAEDCRSARFILKKIPRDDPDVRRVVKECQKTYDDLASLDKLIKKMDKKEKEEELFD 984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0659 984 TIGRFAM PPR: pentatricopeptide repeat domain 637 670 IPR002885 -
Lele32g0659 984 TIGRFAM PPR: pentatricopeptide repeat domain 602 634 IPR002885 -
Lele32g0659 984 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 634 668 IPR002885 -
Lele32g0659 984 MobiDBLite consensus disorder prediction 108 146 - -
Lele32g0659 984 Gene3D Tetratricopeptide repeat domain 809 982 IPR011990 GO:0005515
Lele32g0659 984 Gene3D Tetratricopeptide repeat domain 683 806 IPR011990 GO:0005515
Lele32g0659 984 PANTHER OS02G0132600 PROTEIN 167 975 - -
Lele32g0659 984 Gene3D Tetratricopeptide repeat domain 275 399 IPR011990 GO:0005515
Lele32g0659 984 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 599 633 IPR002885 -
Lele32g0659 984 MobiDBLite consensus disorder prediction 108 130 - -
Lele32g0659 984 MobiDBLite consensus disorder prediction 131 145 - -
Lele32g0659 984 Coils Coil 828 848 - -
Lele32g0659 984 Pfam PPR repeat 704 724 IPR002885 -
Lele32g0659 984 Pfam PPR repeat 602 630 IPR002885 -
Lele32g0659 984 Gene3D Tetratricopeptide repeat domain 563 682 IPR011990 GO:0005515
Lele32g0659 984 Pfam PPR repeat family 633 677 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0659 Lele-ChrLele32 4128827 4138447 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0659 527 798 Glycosyltransferase AT1G05670 20.567 5.66e-12 67.8