Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0637 ATGATGATTATTTCGAAGGCTAGCTTCTGCGTTCTCTTGGTTCTTCTCACGACATCAGTTAGTTCAAAAGATTCTGAAGAAGCACAGGAAGATTTCCTTTGCCAACTGCTTGACCCCAGCTCTGGATTGTTGGATGAGGATACGATACAGCAATTACAGACAACCTGGTCTGTGGATTTGATTCAATTGAAGGAAGAAGTGAGAAATCTTGACTTATGCTTTCCACATGAATCATCATCCAGTTGCACCAATGATATTTGTTCAGAGACTCAATTATTAGCACGAGAAAACGTCCAAAAATTGATTAATGCTTGCCATCCTCAGTTGAAGCAAATCTTTCTTCACTGTTTGAGAAAGAATAATCTTCCACTCCGAAGTGTATCTGGTGATGAAAATGATGATTCCAGATCCAATGATCGTAGAAGAAATCTGGGTCTGGGCTTGCCTCAACACAAATCAAAACCTCCTGGTTCTGGCCCTGCAGTTAAATCATATATCCACACTCAAGAACCGCAACCTCCACTGCCGAAGATAACTGGATCTTTACCTTCAAAAAGGGAAACTCCCACAATGGTGATGTTTGCTAAAGATAAAAAGGATAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAGTGATAATAACATGGTTATAATTGCTATTGCTGCAGCTGGCGTGTCAGTGACGCTACTAGTGGTACTGCTCTGTGTTTTGTGTTGTTGTGGTGATAGTCAAGCTAGAAAATATGACGAGAGGCCCCTTCTCAGTGTGAGCAGGAGTGACTACTCTTCCACAGGTTCTTCTTCTCCCAAATATTCTTCTGGCAATTCAGTAAGAGATCATAAATTTGGGTTTCAAGATAATAATTCAATTGACCACAAAAGCACCTCGTCTCTTAATGGCAATTTTCCTGTTGGATCTGATGTGCAGGAAACTCCTTCACCAGCATTTGCCGGTACTGATGGTGCTGCCAGACCATCATTTGACCTGAAGCCTCCTCCTGGTAGGGTGGGAATCAGCCCTTTGAAACCTCCACCTGGAAGGCCAGATCTCCTTCCCCCTGAACTACCTTCTAGTAATTCTGCTACTGCTGCTCCTCCTGCTCCTCCTCCTCCTGCACCCCCACAGCCACCCAAAACTGCTGCTGGACCTCCCCCTCCCCCACCGCCGGCACTACCTGGTGCCAAAAAAGGTGCAGGGGCAACACCACCACCTCCTCCTCAGAGTGGTAAAGGTCCAGGTCCTCCTCGACCACCTCCACCAATGGGTGGTGTAAAGGGTCGTGGACCTTTAGTTATACATAAAAAGGCGAGAGCTACAGAATCTGGAGCTGCTGATTCAGAAGGTGGTGCTACCAAAGCTAAGTTAAAACCTTTTTTTTGGGATAAGGTTCAAGCCAACTCAGATCAAACCATGGTTTGGAATCAGCTTAAAGCAGGATCATTCCAGGTTGACGAAGAAATGATGGAGTCACTTTTTGGCTATACAAATGCGGATAAAAACAAACCAACCAAGAAAAGATCTGACTCTGTGGAACAGGCGGCACAGTTTATCCAGATCATTGACTCAAAGAAAGCACAAAATTTGTCAATTCTATTGCGAGCTTTGAATGTGACTATGGAAGAAGTTTCTGATGCACTCAACGAAGGAAATGAGCTTCCCTCAGAATTTATCCAATCCTTGCTAAAGATGTCACCCACATCTGAGGAAGAACTTAAGCTCAGACTTTTCAATGGCAACCTGGCTCAACTTGGGCCTGCTGACCGGTTTCTGAAAGCCCTTGTTGATATTCCATTTGCTTTTAAACGAATGGAATCACTTCTTTTTATGGGTACTATTCAAGAGGAGCTCACCTTCACCAAGGATGCCTTTGCAGTTTTAGAGGTTGCTAGCGCAGAACTAAAAGGTAGTCGGCTGTTCCTGAAGCTTCTAGAAGCCGTTCTCAAAACTGGTAACCGTATGAATGATGGAACATTCCGTGGTGGCGCACAAGCATTTAAACTTGACACCCTTCTAAAACTGTCTGATGTTAAAGGAGTGGATGGCAAAACTACACTCTTACACTTTGTTGTTAAAGAGATAATCCGATCTGAAGGCATAAGAGCACTTCGTGCGACGAGAGAGAGCAAGAGTTTCTCTAGCATTAAAACAGATGACCTGTATGAGGAAGTCTCCACCGAATCGGAAGAGCGGTATCGCGAACTTGGTCTTCAGGTGGTATCTAGATTGAGCAGTGAGCTTGAGAATGTGAAGAAAGCAGCAGCTCTAGATGCTGATGTATTAACAGGAACAACTGCAAAACTTGGGTATTCTCTATTGAAAACCAAAGAATTCTTAAATAGAGACCTTAAGGAGTTAGAAGAAGAAAGTAAAAAAGGAGGGTTTCATCAGACAGTGGAGTGTTTTGTGGAGAATGCTGAAGGTGCTATCACGAGCCTGCTGGAAGAAGAGAAGAGGATCACAGCTTTGGTGAAGAGTACAGTTGACTACTTCCATGGAAACAGTGGGAAGGATGAAGGGTTACGATTGTTTCAGGTCGTACGAGACTTCTTGGTCATACTGGATAAGGTATGCAAAGAGGTTGGAGAAGAACAGAAGAAGGCAGCAGCAAAAGCAGCTCCAAAACAAGAGCCCCCTCCTAATCCTAAGCCTCCTCCTTCTGAAGCTCGCCCACCACCACACAAGAAGCTTCTTTCAGGGTTATCAGATAGGAGGATGGATGACTTTAGTTCAGATGATGACAGTCCATAG 2751 0.4409 MMIISKASFCVLLVLLTTSVSSKDSEEAQEDFLCQLLDPSSGLLDEDTIQQLQTTWSVDLIQLKEEVRNLDLCFPHESSSSCTNDICSETQLLARENVQKLINACHPQLKQIFLHCLRKNNLPLRSVSGDENDDSRSNDRRRNLGLGLPQHKSKPPGSGPAVKSYIHTQEPQPPLPKITGSLPSKRETPTMVMFAKDKKDKKKKKKKKKKKSDNNMVIIAIAAAGVSVTLLVVLLCVLCCCGDSQARKYDERPLLSVSRSDYSSTGSSSPKYSSGNSVRDHKFGFQDNNSIDHKSTSSLNGNFPVGSDVQETPSPAFAGTDGAARPSFDLKPPPGRVGISPLKPPPGRPDLLPPELPSSNSATAAPPAPPPPAPPQPPKTAAGPPPPPPPALPGAKKGAGATPPPPPQSGKGPGPPRPPPPMGGVKGRGPLVIHKKARATESGAADSEGGATKAKLKPFFWDKVQANSDQTMVWNQLKAGSFQVDEEMMESLFGYTNADKNKPTKKRSDSVEQAAQFIQIIDSKKAQNLSILLRALNVTMEEVSDALNEGNELPSEFIQSLLKMSPTSEEELKLRLFNGNLAQLGPADRFLKALVDIPFAFKRMESLLFMGTIQEELTFTKDAFAVLEVASAELKGSRLFLKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLSDVKGVDGKTTLLHFVVKEIIRSEGIRALRATRESKSFSSIKTDDLYEEVSTESEERYRELGLQVVSRLSSELENVKKAAALDADVLTGTTAKLGYSLLKTKEFLNRDLKELEEESKKGGFHQTVECFVENAEGAITSLLEEEKRITALVKSTVDYFHGNSGKDEGLRLFQVVRDFLVILDKVCKEVGEEQKKAAAKAAPKQEPPPNPKPPPSEARPPPHKKLLSGLSDRRMDDFSSDDDSP 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0637 916 Coils Coil 195 215 - -
Lele32g0637 916 MobiDBLite consensus disorder prediction 897 916 - -
Lele32g0637 916 MobiDBLite consensus disorder prediction 337 353 - -
Lele32g0637 916 SUPERFAMILY Formin homology 2 domain (FH2 domain) 385 871 - -
Lele32g0637 916 Pfam Formin Homology 2 Domain 451 853 IPR015425 -
Lele32g0637 916 MobiDBLite consensus disorder prediction 124 212 - -
Lele32g0637 916 MobiDBLite consensus disorder prediction 257 429 - -
Lele32g0637 916 Gene3D Formin, FH2 domain 452 879 IPR042201 -
Lele32g0637 916 ProSiteProfiles Formin homology-2 (FH2) domain profile. 446 880 IPR015425 -
Lele32g0637 916 MobiDBLite consensus disorder prediction 257 309 - -
Lele32g0637 916 PANTHER FORMIN-RELATED 135 890 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Lele32g0637 916 MobiDBLite consensus disorder prediction 875 892 - -
Lele32g0637 916 MobiDBLite consensus disorder prediction 363 425 - -
Lele32g0637 916 MobiDBLite consensus disorder prediction 864 916 - -
Lele32g0637 916 SMART it6_source 446 869 IPR015425 -
Lele32g0637 916 MobiDBLite consensus disorder prediction 198 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0637 Lele-ChrLele32 3977113 3982019 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0637 412 907 FH2 protein (formin) Gene Family AT5G54650 61.952 0.0 579
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0758 09 5964024 5965781 Lele32g0637 32 3977113 3982019 CCT
Lele10g0688 10 5198252 5200012 Lele32g0637 32 3977113 3982019 CCT
Lele29g0655 29 4090602 4098230 Lele32g0637 32 3977113 3982019 hybridization
Lele18g0418 18 2455635 2456790 Lele32g0637 32 3977113 3982019 hybridization