Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0631 ATGGACTTAGGAAACTCACCTAATTCCTCCTTTTCTAATTATAATCATTTTGATTCTGATTCTCTTTCAACATTGAGCGACGGCCAGGATAATAATAAATACAGTTATGGTGAGATCCTTTCTGCTTTGAGCCCTTCTTGTGACTCTTCGCGGCTGGAAAACAATCACAATTGGCACAATTCAATGCCGTCCATGGATTGTTGTCAAGATACACCGTGTCTATATTCTTCTAGAAGCTCTCTTCTGAATGATGTAAATTGCAGCCAGAAAGTCGGACATGTTCTGCAAGGAATAGAATCAACTCTAATGGCCCCTAACAATGGCAATGATGCAACCTCATCAAATAGCCCGTTGACGACTTCTGGCCGAAGAAACATATCTTGGTGTCATGACCAGGGTTTACAGAGTTTTCAAACTCGGCCATCTTTTGCTTCTAGTAGTAGTCAGCAGTTGAGTGAAGCTGCACAAGCAGAGAAACGTCACAAAGCAATAATAGAGGAAGAACTGGTGCAAGGTTTTCCACCAACAAGTAATTTGAGACAGTTGTTGATTGCATGTGCCAAAGCGCTTTCAGAGAACAACCTGAAAGATTTTGGTCTGTTGATTGAAAGGGCTAGGAGTTGTGTGTCTATCACGGGCGAGCCAATCCAACGACTCGGAGCTTATTTGGTAGAAGGGCTTGTTGCAAGGAAGGAGGCATCTGGGAACAACATTTATCGTTCTCTCAAGTGCAAAGAACCAGAAGGCATAGACTTGCTCTCTTATATGCACATGCTATACGAAATCTGCCCATACTTGAAATTCGGTTACATGGCCGCAAATGGAGCCATAGCAGAAGCTTGCAGAAACGAGGACCGTATTCACATCATAGACTTTCAGATTGCTCAGGGAACTCAATGGGTGACACTGCTTCAAGCTCTTGCAGCAAGACCTAGTGGGGCTCCATATGTTAGGATCACAGGGATTGATGATCCTGTTTCTAACTATGCTCGTGGCAATGGGCTAGAGGCAGTTGGAAAACGGTTGGCCATGATCTCTGAGAAATTTCACATACCAGTTGAGTTTCATGGATTGCCAGTTTTCGGCCCTGATGTCACCTGGGACATGTTTGACATCCGACCCGGCGAGGCTTTGGCTGTGAACTTTCCTTTACAGCTCCATCATACAGCTGATGAAAGTGTTGATGTTAATAATCCAAGGGATGGTCTTCTGAGAATGGTTAAATCACTATCTCCAAAGGTTGTCACATTGGTGGAACAAGAATCAAACACAAACACAACTCCTTTCTTCAACAGGTTCATAGAAACATTGGATTTCTACTTGGCAATGTTCGAGTCCATCGATGTCACGCTCTCGAGAGACAACCAGGCGAGGATTAACGTTGAGCAACATTGTTTGGCGAGGGATGTTGTGAATGTCATTGCTTGTGAAGGGAAGGAAAGAGTAGAGCGACATGAACTGTTCGGAAAGTGGAAGTCAAGGTTGACAATGGCGGGATTTCAACAATATCCAATGAGCACATATGTAAATTCTGTGATTCGGAGCCTGTTGAGACACTATTCAGAGAATTATACACTGGTGGACAAGGATGATGCAATGTTGTTGGGGTGGAAGAGTAGAAATCTGATATCAGCCTCAGCATGGCATTGA 1650 0.4376 MDLGNSPNSSFSNYNHFDSDSLSTLSDGQDNNKYSYGEILSALSPSCDSSRLENNHNWHNSMPSMDCCQDTPCLYSSRSSLLNDVNCSQKVGHVLQGIESTLMAPNNGNDATSSNSPLTTSGRRNISWCHDQGLQSFQTRPSFASSSSQQLSEAAQAEKRHKAIIEEELVQGFPPTSNLRQLLIACAKALSENNLKDFGLLIERARSCVSITGEPIQRLGAYLVEGLVARKEASGNNIYRSLKCKEPEGIDLLSYMHMLYEICPYLKFGYMAANGAIAEACRNEDRIHIIDFQIAQGTQWVTLLQALAARPSGAPYVRITGIDDPVSNYARGNGLEAVGKRLAMISEKFHIPVEFHGLPVFGPDVTWDMFDIRPGEALAVNFPLQLHHTADESVDVNNPRDGLLRMVKSLSPKVVTLVEQESNTNTTPFFNRFIETLDFYLAMFESIDVTLSRDNQARINVEQHCLARDVVNVIACEGKERVERHELFGKWKSRLTMAGFQQYPMSTYVNSVIRSLLRHYSENYTLVDKDDAMLLGWKSRNLISASAWH 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0631 549 Pfam GRAS domain family 179 548 IPR005202 -
Lele32g0631 549 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 142 545 IPR005202 -
Lele32g0631 549 ProSiteProfiles GRAS family profile. 170 549 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0631 Lele-ChrLele32 3939602 3941251 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0631 178 548 GRAS Transcription Factor Family AT5G48150 63.441 1.63e-172 495
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele32g0631 GRAS 1.6e-124 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g1123 17 21498055 21499650 Lele32g0631 32 3939602 3941251 hybridization
Lele30g0749 30 11928953 11931315 Lele32g0631 32 3939602 3941251 hybridization