Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0621 ATGGCGGCCCTGAAGCTGCTTATCTCTCAAGCTCGCCGCCATTACCTCACCAATCATCATTCTCATTTCCACCCTTCCCTTTTTCTTTGGTCTCGGAGATCCCTTTGTTCTTCTTCTTCTTCACAATCCGATGAATCAGACTCGAAACCTCCACCCCCTCCAAGTAGACCCTCCCCAACCATTTCAATACAGCCTGTTTCATACCCGGTTAAACCTAAAGATCCCTCACCTCTAGATACTACTGAATCCTCCGAAGCTCAATTACAAAATCAATCGCCGGCGACACCACCTCCTCGCAGTCCACGTGGACCGACATTGGCGGAAGATACCGCAGAATCACGGCGGGCTTGGACCAGGGAAGATATTCGGTATGTAAAGGACGCTCCTTCGATATCGCCGGTGTCCTATCCTTTGCGAGTGGCGCCACTTCCTGAAGATAAGACTATTGCTGGTGCTGAAGCAGGAAAGGATGGTGGTGCGAATGCGAACGAAGAAATTGAGAAGGAGACTAGAAAAATTAGGGCGGATGATCAGTTAAAGAGGAGAGTTATCAGAGCAGCAGAAGAGGAGAAGGTGCGGGTTCCTTTTCCAACTCTGATAAAGGCGAAGCAAAAGGAGAAGCTGCCTATCCTTGATTTGACGGAGGCAATTCGCCAAATTAAGGGCAATGCAAAGGCAAAATTTGATGAAACTGTTGAAGTGCATGTAAGATTGGGTATTGAATCAAAGCGAACAGAACTGGCTGTTCGTGGTACTATGACTCTGCCTCATGGTGCCCCTAAGGCCGTCAGTGTGGCTGTTTTTGCAGAAGGAGCTGACGCAGAGGAAGCTAGAGCTGCAGGAGCTGATATAGTTGGTGGTAAAGAGCTTATTGAGGAGATTGCTAATGGTAACAACAAGCTTAGAGTTGACAAGTGCTTCTCAACTCCAGGAATGGCACCTCATCTTGGAAAGATAGCACAATATCTTAGAAAACGTAGACTGATGCCAGACAAGAAACTAGGTACTCTGACCAGTGATATTCCTGGGCAGTTGAAAGAGTTAAGACGGGGTCGTGTTGAGTTTAAAATGGAGAGTAAATCAATTGTGCATGCGGGAGTTGGTAAGGTAAGCTTCAAAGAGGATCAATTACGTGAAAACATAGGTGCATTCATGAATGCTCTATTGGTTGCCAAGCCTGCTGGCTTAAAGAAGACTTCAAAATATGCTGGGTATGTCCTATCTGTCCATATGTGCAGCACGATGGGCCCAGGATTCCCGGTTTCAATACAATCTTTATCAAGAGCAGCTGATAATTACAAGTCTCTGAATGTAGTTTGA 1320 0.4636 MAALKLLISQARRHYLTNHHSHFHPSLFLWSRRSLCSSSSSQSDESDSKPPPPPSRPSPTISIQPVSYPVKPKDPSPLDTTESSEAQLQNQSPATPPPRSPRGPTLAEDTAESRRAWTREDIRYVKDAPSISPVSYPLRVAPLPEDKTIAGAEAGKDGGANANEEIEKETRKIRADDQLKRRVIRAAEEEKVRVPFPTLIKAKQKEKLPILDLTEAIRQIKGNAKAKFDETVEVHVRLGIESKRTELAVRGTMTLPHGAPKAVSVAVFAEGADAEEARAAGADIVGGKELIEEIANGNNKLRVDKCFSTPGMAPHLGKIAQYLRKRRLMPDKKLGTLTSDIPGQLKELRRGRVEFKMESKSIVHAGVGKVSFKEDQLRENIGAFMNALLVAKPAGLKKTSKYAGYVLSVHMCSTMGPGFPVSIQSLSRAADNYKSLNVV 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0621 439 CDD Ribosomal_L1 213 421 IPR028364 -
Lele32g0621 439 PANTHER 54S RIBOSOMAL PROTEIN L1, MITOCHONDRIAL 126 432 - -
Lele32g0621 439 SUPERFAMILY Ribosomal protein L1 209 422 IPR023674 -
Lele32g0621 439 Gene3D - 258 351 IPR016095 -
Lele32g0621 439 MobiDBLite consensus disorder prediction 77 93 - -
Lele32g0621 439 FunFam 50S ribosomal protein L1 258 351 - -
Lele32g0621 439 Gene3D - 213 421 - -
Lele32g0621 439 Pfam Ribosomal protein L1p/L10e family 223 417 IPR028364 -
Lele32g0621 439 MobiDBLite consensus disorder prediction 37 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0621 Lele-ChrLele32 3881247 3885416 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0637 29 3939883 3943859 Lele32g0621 32 3881247 3885416 hybridization
Lele30g0760 30 11980590 11986029 Lele32g0621 32 3881247 3885416 hybridization