Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0617 ATGGCTGAGAGGGAGAGAGCAATTTACATATCAAACGAAAACAAGGACGAAGATAGTAACAACAACAACAACATTAGAGTCAAACCCTCTTCATCATCTTCTTCTTCTCTGCTTGTTCAAAAGGGTTCGTTGTTTGACCTGAACGAAGAAGCTGTGGACGATCTTGGTGGTGACGTTAATGGAGGATCGTCGTCGTCATTCTCATCAGGAGAAGGTAATGCGAGTAGCAACAACTCAAGTTCAGAAGTGAGAGAGAGAACAACGAGTAGTGTGAGACAATATGTGAGATCCAAAATGCCAAGGCTTCGTTGGACTCCTGAACTCCATCTTGCTTTTGTTCGTGCTGTAGAAAGGCTTGGTGGACTGGAAAAAGCAACGCCCAAGTTAGTTTTACGGTTGATGAATGTGAGAGGACTTAGCATTGCGCATGTTAAGAGTCATCTGCAGATGTATCGAAGCAAGAAACTTGATGAGTCTGGCCGAGTTTTATCCCAAAATAGGGCAAAATTAATGCAAGGACAAAGAAATCATCATACTTTGGATATGTACCAAAGATTTAGTGCTTATCATCATCAAGGAGGACACTTTGGTATTGATGGCTATCTCCCAACACCATCTGTCGTTGTGAAGCCAATTTTGGACTTTAAACCTCATGGTTCTTCAAGATTTCAACCGGGGACAAGATCAGGTTCATCTGTTGTATATGAGGTTGGTAAAGACAGAAGGATGATGATTCAGAGGAACAAGAAGATTATTAGAGGATGTAACCTAATTGAGGTTAACGATGAAACTAATATTAGAATAAGAAATGGACCTCTTAGGCCAAACCTATTTGTGGAAGACGAGAAATGGCCTCCTCGTGAAAGAACTGACAAACCTTATTGGGATGACAAATATTGTACATGGAACACCACAAATTGCTTCATCAATAATAGTAACCTTCAACATCAACCTACCCACCTCAACTTTGATGATTCCCAGGAGAAGAAGGAACCACCCTGCAGTTTTCTAAAGCCATGTTTAACCCAAGATTCTTCGAATAATGTTGCAGAAGTGAACAATCCTTGTCCTCCAGATAATGATGGAGGAATCAATACGATGTTGTCTCTTTCATTGTAA 1119 0.4066 MAERERAIYISNENKDEDSNNNNNIRVKPSSSSSSSLLVQKGSLFDLNEEAVDDLGGDVNGGSSSSFSSGEGNASSNNSSSEVRERTTSSVRQYVRSKMPRLRWTPELHLAFVRAVERLGGLEKATPKLVLRLMNVRGLSIAHVKSHLQMYRSKKLDESGRVLSQNRAKLMQGQRNHHTLDMYQRFSAYHHQGGHFGIDGYLPTPSVVVKPILDFKPHGSSRFQPGTRSGSSVVYEVGKDRRMMIQRNKKIIRGCNLIEVNDETNIRIRNGPLRPNLFVEDEKWPPRERTDKPYWDDKYCTWNTTNCFINNSNLQHQPTHLNFDDSQEKKEPPCSFLKPCLTQDSSNNVAEVNNPCPPDNDGGINTMLSLSL 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0617 372 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 100 155 IPR006447 GO:0003677
Lele32g0617 372 MobiDBLite consensus disorder prediction 59 91 - -
Lele32g0617 372 MobiDBLite consensus disorder prediction 1 37 - -
Lele32g0617 372 MobiDBLite consensus disorder prediction 14 37 - -
Lele32g0617 372 MobiDBLite consensus disorder prediction 55 91 - -
Lele32g0617 372 SUPERFAMILY Homeodomain-like 98 154 IPR009057 -
Lele32g0617 372 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 75 179 - -
Lele32g0617 372 FunFam Myb family transcription factor 98 156 - -
Lele32g0617 372 Pfam Myb-like DNA-binding domain 102 152 IPR001005 -
Lele32g0617 372 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 96 156 IPR017930 -
Lele32g0617 372 Gene3D - 99 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0617 Lele-ChrLele32 3843520 3846191 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0617 86 182 G2-like Transcription Factor Family AT2G42660 64.948 3.81e-35 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele32g0617 Myb_DNA-binding 7.9e-07 CL0123