Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0615 ATGGAAGTGTGGTTTTTGGATATTCTTCGTGAGAGAGTTGGGTCACGTGGACTCCAGCTTCAAGACATGGATGAGAGACGAAATGATGAAGGGCTCGCAGATCAAGGGCCATCAAACTCTTCATGGTGGCCATCAGACTTTGTTGAAAAATTTGGATCTGTTTCTCTGGGTTCTCAAGAAGAGGCCTTAAATAACAAAGAATCACCTAGACATTTTGAGCAAGATGTTTTGTCACCTCATAAAGCATCGCAAATTCTCTGGCATACTGGAATGCTTTCAGAACCAATACCAAATGGTTTTTATTCAGTCATTCCTGATAAAAGGCTCAAGGAAATTTTTGATAATATTCCTACTATGGATGAGATTCATGCTTTGGGTGCAGAGGGTCTAAAGGCTGATGTCATTTTGGTGGACGCAGAGAAAGATAAAAAAGTATCTATGTTGAAGCAATATGTTGTGGCCCTAGTGAAAGGATTGAACTCAAATCCAGCTGCGATAATAAGAAAGATAACTGGACTAGTTTCTGATTTTTATAAACGATCAAATGTGGAAAGTCCAGCAAAAGCTGCACTTGAGGAAACCTCCCACATGTTTGAGAATCGAGGTGCCCAGATACTGGGACAAATAAAGAATGGTTCATGCCGTCCTCGAGCAATCTTATTTAAAGTGTTAGCAGATACTGTAGGTCTTGAAAGTAGGCTCATGGTGGGTTTGCCAAACGATGGGGTTGTTGAATATGTAGACTCATACAAGCATATGTCAGTGATTGTTGTATTAAATTCTGTGGAACTGCTGGTTGATCTCATGCGATGCCCTGGTCAATTATTACCTCGATCAAACAAGGCAATTTTCATGACACATATTTCTGCAGCAGGAGAGAGTGATTCTGCAGAAAATGATTCCTGTGATTCACCACTAGAACCAAACAGCCCTTTATATGGGGTTTCAGAGAAAGTGGATACTGACAGCGCTGAAAAGGAGGAGAACCTCCCATTGCAGAGGAGATTTGATGTATCAGGCCCTTCCTTGCGAAATTTGATGTTACGGTCAAATACCAGTCTGGATAGGAAATTGAGTTTTTCTCATAGTGAACCCAATATTGCAATTGCATTTGGTCGGCGTAGTCGAAGAAAGGTCATTGCAGAACAGAGGACAGCTAGTTCCAGTCCAGAGCATCCATCTTTTAAAGCACGGGGACGGTCCATGCTTAGTGGTGATAGGAAAGCATTCAGAGACTTTGCTGATGATGAGGCTGCATCAAGGTCAGATGGCGCATCTTCATCAGAAGCCCGTAGGATTAGAAGAAGAAGCATCAGCATTACACCTGAGATTGGTGATGATATCGTAAGGGCTGTACGTGCGATGAATGAAACACTGAAGCAGAATCGTCTTTTGAGAGAGCAAGGGGATAATAGCTCAACAAATAGCGTTGGGGACCTTCAGAAAAATGTATGTCTGCATTACTATATGTCAAATTTCCATCGAGATGGTCATGAGGGATCTACTTTGAATTCTCTTCCACCTGATCAAGTAAATTCCCAGAAAGCAATGTCATTACCCTCTTCACCGCATGGTTACAGGGGTCAGACATCTGAGAGAAGTGGACTATCGAGATATGGAGTGAACGAATTGCAGTCAACATGGAATAAAATCCTTGAATCTTCAATGTTTAATAATAAACCCCTCTTACCATATGAAGAATGGAATATTGACTTCTCAGAAATAACTGTTGGAACCCGTGTTGGGATTGGGTTTTTCGGAGAAGTCTTTCGTGGCGTATGGAATGGCACAGACGTTGCTATCAAGGTTTTTCTGGAGCAAGATTTAACTGCTGAAAACATGGAAGATTTCTGCAATGAGATATCAATTCTCAGCCGGCTTCGACATCCAAATGTAATCTTATTTCTTGGGGCGTGTACAAAGCCTCCACGCTTGTCAATGGTTACCGAGTACATGGAAATGGGGTCACTGTATTACTTGATCCATTTGAGCGGCGAAAAGAAGAAGCTTAGCTGGCGGAGAAGACTGAAGATGTTGCGAGATATATGCAGGGGGCTGATGTGCATACACCGAATGAAGATAGTGCACCGTGACCTGAAAAGTGCAAATTGTCTTGTGAATAAACATTGGACTGTGAAAATCTGTGATTTTGGGCTTTCAAGGATCATGACAGAGTCTAGTATCAAAGACGCTCCATCGGCCGGAACTCCAGAATGGATGGCTCCTGAACTTATTCGGAATGAACCATTCAATGAAAAGTGCGATATATTTAGCCTTGGGGTGTTGATGTGGGAGCTTTGTACTTTGAACAGGCCATGGGAGGGTATTCCACCAGAAAGGGTGGTTTATGCTGTTGCTAACGAGGGATCTAGACTGGACATTCCTGAAGGCCCGTTAGGCAAGCTCATTGCAGATTGTTGGGCAGAACCAAATGAACGGCCAAATTGTGAGGAGATCCTCTGTCGCTTGCTTGATTGCGAGTACTCTATGTGCTGA 2496 0.4279 MEVWFLDILRERVGSRGLQLQDMDERRNDEGLADQGPSNSSWWPSDFVEKFGSVSLGSQEEALNNKESPRHFEQDVLSPHKASQILWHTGMLSEPIPNGFYSVIPDKRLKEIFDNIPTMDEIHALGAEGLKADVILVDAEKDKKVSMLKQYVVALVKGLNSNPAAIIRKITGLVSDFYKRSNVESPAKAALEETSHMFENRGAQILGQIKNGSCRPRAILFKVLADTVGLESRLMVGLPNDGVVEYVDSYKHMSVIVVLNSVELLVDLMRCPGQLLPRSNKAIFMTHISAAGESDSAENDSCDSPLEPNSPLYGVSEKVDTDSAEKEENLPLQRRFDVSGPSLRNLMLRSNTSLDRKLSFSHSEPNIAIAFGRRSRRKVIAEQRTASSSPEHPSFKARGRSMLSGDRKAFRDFADDEAASRSDGASSSEARRIRRRSISITPEIGDDIVRAVRAMNETLKQNRLLREQGDNSSTNSVGDLQKNVCLHYYMSNFHRDGHEGSTLNSLPPDQVNSQKAMSLPSSPHGYRGQTSERSGLSRYGVNELQSTWNKILESSMFNNKPLLPYEEWNIDFSEITVGTRVGIGFFGEVFRGVWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMVTEYMEMGSLYYLIHLSGEKKKLSWRRRLKMLRDICRGLMCIHRMKIVHRDLKSANCLVNKHWTVKICDFGLSRIMTESSIKDAPSAGTPEWMAPELIRNEPFNEKCDIFSLGVLMWELCTLNRPWEGIPPERVVYAVANEGSRLDIPEGPLGKLIADCWAEPNERPNCEEILCRLLDCEYSMC 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0615 831 ProSitePatterns Protein kinases ATP-binding region signature. 581 602 IPR017441 GO:0005524
Lele32g0615 831 Pfam Protein tyrosine and serine/threonine kinase 576 822 IPR001245 GO:0004672|GO:0006468
Lele32g0615 831 MobiDBLite consensus disorder prediction 294 329 - -
Lele32g0615 831 ProSiteProfiles Protein kinase domain profile. 575 824 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele32g0615 831 FunFam Serine/threonine-protein kinase isoform 1 565 653 - -
Lele32g0615 831 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 378 823 - -
Lele32g0615 831 MobiDBLite consensus disorder prediction 380 401 - -
Lele32g0615 831 SUPERFAMILY Protein kinase-like (PK-like) 548 822 IPR011009 -
Lele32g0615 831 SMART serkin_6 575 824 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele32g0615 831 Gene3D Phosphorylase Kinase; domain 1 568 653 - -
Lele32g0615 831 MobiDBLite consensus disorder prediction 21 43 - -
Lele32g0615 831 CDD STKc_MAP3K-like 581 823 - -
Lele32g0615 831 MobiDBLite consensus disorder prediction 499 533 - -
Lele32g0615 831 ProSitePatterns Serine/Threonine protein kinases active-site signature. 694 706 IPR008271 GO:0004672|GO:0006468
Lele32g0615 831 Pfam Ethylene-responsive protein kinase Le-CTR1 81 275 - -
Lele32g0615 831 Gene3D Transferase(Phosphotransferase) domain 1 654 830 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0615 Lele-ChrLele32 3817959 3827265 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0615 23 831 MAP Kinase Kinase Kinase AT3G58640 71.011 0.0 1184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Lele32g0615 PK_Tyr_Ser-Thr 1.1e-60 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0786 09 6205539 6208630 Lele32g0615 32 3817959 3827265 CCT
Lele10g0714 10 5439644 5443197 Lele32g0615 32 3817959 3827265 CCT
Lele29g0631 29 3878619 3888753 Lele32g0615 32 3817959 3827265 hybridization
Lele30g0767 30 12036181 12045341 Lele32g0615 32 3817959 3827265 hybridization