Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0612 ATGATCAGAGGCGCAAGCTACCTTCACCTTTCTCTGCACATTTTCAGTGGATGGAGATTAGAGGCTTACATAAAGTTCACTGTGAGAGAGATGACGACTCGGAACATTGAGAAGATGGGTTCCATTGACACTCAACTGCGATTGCTGGCGCCTGGGAAGTTGTCTGATGATGATAAGCTAGTCGAGTATGATGCGTTGTTAATGGACCGATTCCTCGACATTCTTCAGGATTTGCATGGCGAAGACATCAGAGAAACGGTTCAAGACTGCTATGAGCTGTCAGCTGTGTATGAAGGGAAGCATGATCCTGAGAAGTTGGAGGAGCTTGGGAATAAGCTGACTGGTCTTGATGCAGGGGACTCTATCGTGGTGGCCAAATCATTTTCTCACATGCTGAATTTGGCCAACTTGGCCGAGGAAGTCCAGATAGCCTACAGAAGAAGGATCAAGTTATTAAAGAAGGGCGACTTTGCTGATGAGAACTCGGCCATAACTGAATCTGACATTGAGGAGACCCTCAAGAGGCTTGTGAATCAATTGAAGAAGACTCCGCAGGAAGTGTTTGAGGCTTTGAAGAACCAAACTGTAGATTTGGTCCTGACTGCTCATCCTACTCAGTCTGTCCGTAGATCTTTGCTACAAAAGCATTCTAGGATAAGGAATTGCTTAACTCAATTGTATGCTAAAGATATAACACCTGACGATAAGCAGGAACTCGATGAGGCCTTACAAAGGGAGATTCAAGCTGCATTTCGTACAGATGAAATTAGAAGGAGTCCTCCTGCCCCTCAAGATGAGATGAGGGCAGGAATGAGCTACTTTCACGAAACAATCTGGAAAGGGGTACCTAAGTTTTTGCGCCGGGTTGATACAGCTCTGAAGAACATTGGAATAAATGAACGTGTGCCATATAACGCCCCTGTTATTCAATTCTCTTCTTGGATGGGAGGGGATCGTGATGGAAATCCCAGAGTAACCCCAGAAGTTACAAGAGATGTTTGCTTATTGGCTAGAATGATGGCTGCTAATTTGTACTTCTCTCAGATAGAAGATCTTATGTTTGAGCTGTCAATGTGGCGCTGCAATGATGAGCTCCGTGTTCGTGCTGATCAACTCCATAGTTCATCAAAGAGAGATGCAAAACATTATATTGAGTTTTGGAAGCAGATTCCTCCTAATGAGCCATACCGTGTTGTTCTTGGTGATGTGAGAGACAAACTGTATAATACTCGGGAACATGCTCGTCAAATATTAGCTAATGGGACCTCTGACATCCCTGAGGAGACAACCTTCACAGATGTTGAGCAGTTCCTGGAGCCTCTTGAACTCTGCTATAGGTCACTCTGTGCATGTGGGGACCGATCGATAGCTGATGGAAGCCTCCTTGATTTCTTACGGCAAGTTTCAACTTTTGGACTGTCACTTGTAAGGCTTGACATTCGTCAAGAATCAGACAGGCACACTGCTGTTATGGATGCAATTACAAGACACTTGGGTGTTGGTTCTTACAGAGAATGGTCTGAGGAACGCCGGCAGCAGTGGCTCTTGTCTGAGCTCAGTGGGAAGCGTCCTCTTTTTGGCCATGACCTTCTTAAAACTGAAGAAATTTCTGATGTGTTAGAAACCTTCAATGTCATCTCAGAACTTCCACCAGACAATTTCGGTGCCTACATCATCTCAATGGCAACATCTCCATCCGATGTGCTTGCTGTAGAGCTTTTACAGCGTGAATGTCATGTGAAAAAGCCATTAAGGGTTGTCCCCTTGTTTGAAAAGCTTGCTGATCTTGAGGCTGCTCCTGCTGCGTTAGCTCGTCTGTTCTCGATAGATTGGTACAGAAACCGCATAAATGGGAAGCAAGAAGTTATGATAGGATACTCAGACTCAGGAAAGGATGCTGGCCGCCTTTCTGCAGCTTGGGCACTATACAAAGCTCAAGAAGAGCTCATAAAGGTCGCAAAGGAGTTTGGCATTAAGCTTACAATGTTCCATGGCAGAGGAGGAACTGTTGGAAGAGGAGGAGGTCCCACTCATCTTGCAATACTGTCGCAGCCACCAGAGACCATTCATGGGTCACTTCGTGTGACGGTTCAAGGTGAAGTCATTGAGCAGTCATTTGGGGAAGAACACTTGTGCTTTAGAACACTTCAGCGCTTCTCTGCTGCAACATTAGAGCATGGAATGCATCCTCATGTGTCTCCAAAACCAGAATGGCGAGCTCTCATGGATGAGATGGCAGTTATTGCTACAAAGGAGTATCGCTCTGTTGTTTTCCAGGAACCCTGTTTTGTTGAATACTTCCGATGTGCAACACCTGAGTTGGAGTATGGACGTATGAACATTGGCAGCCGACCCTCAAAGAGAAAGCCAAGTGGAGGCATTGAATCACTTCGGGCTATTCCTTGGATCTTTGCTTGGACCCAAACAAGGTTTCACCTACCAGTGTGGCTTGGGTTTGGGTCAGCATTTAAGCATGTGATTGAGAAGGATCCCAAGAATCTGCAAATGCTTCGAGATATGTATAATCAATGGCCTTTCTTTAGAGTAACCCTTGATTTGATTGAGATGGTGTTTGCCAAGGGAGACCCAGGAATTGCTGCTTTATATGACAAACTCCTAGTCTCAGGAGAACTAAGGCCTCTTGGAGAGCGTTTAAGGTCTAAATATGAAGAAACCAAGAGCCTTCTTCTCCAGATTGCTGGGCACAGAGATGTTCTTGAGGGAGACCCTTACTTAAAGCAAAGACTGCAACTTCGCGATTCATACACGACAACTCTGAATGTTTTGCAAGCTTACACTCTGAAGCGAATCCGTGATCCAGACTACCATGTGAAGTTGAGGCCTCATCTGTCAAAGGAGTACATGGAATCAAGCAAGCCAGCAGCAGAGCTCGTGAAACTGAACCCAACAAGCGACTATGCTCCTGGTCTGGAGGACACTCTTATTTTGACAATGAAGGGTATTGCTGCCGGCATGCAAAACACTGGTTGA 2991 0.4554 MIRGASYLHLSLHIFSGWRLEAYIKFTVREMTTRNIEKMGSIDTQLRLLAPGKLSDDDKLVEYDALLMDRFLDILQDLHGEDIRETVQDCYELSAVYEGKHDPEKLEELGNKLTGLDAGDSIVVAKSFSHMLNLANLAEEVQIAYRRRIKLLKKGDFADENSAITESDIEETLKRLVNQLKKTPQEVFEALKNQTVDLVLTAHPTQSVRRSLLQKHSRIRNCLTQLYAKDITPDDKQELDEALQREIQAAFRTDEIRRSPPAPQDEMRAGMSYFHETIWKGVPKFLRRVDTALKNIGINERVPYNAPVIQFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANLYFSQIEDLMFELSMWRCNDELRVRADQLHSSSKRDAKHYIEFWKQIPPNEPYRVVLGDVRDKLYNTREHARQILANGTSDIPEETTFTDVEQFLEPLELCYRSLCACGDRSIADGSLLDFLRQVSTFGLSLVRLDIRQESDRHTAVMDAITRHLGVGSYREWSEERRQQWLLSELSGKRPLFGHDLLKTEEISDVLETFNVISELPPDNFGAYIISMATSPSDVLAVELLQRECHVKKPLRVVPLFEKLADLEAAPAALARLFSIDWYRNRINGKQEVMIGYSDSGKDAGRLSAAWALYKAQEELIKVAKEFGIKLTMFHGRGGTVGRGGGPTHLAILSQPPETIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFSAATLEHGMHPHVSPKPEWRALMDEMAVIATKEYRSVVFQEPCFVEYFRCATPELEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTRFHLPVWLGFGSAFKHVIEKDPKNLQMLRDMYNQWPFFRVTLDLIEMVFAKGDPGIAALYDKLLVSGELRPLGERLRSKYEETKSLLLQIAGHRDVLEGDPYLKQRLQLRDSYTTTLNVLQAYTLKRIRDPDYHVKLRPHLSKEYMESSKPAAELVKLNPTSDYAPGLEDTLILTMKGIAAGMQNTG 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0612 996 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 63 996 IPR015813 GO:0003824
Lele32g0612 996 PRINTS Phosphoenolpyruvate carboxylase signature 198 211 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lele32g0612 996 PRINTS Phosphoenolpyruvate carboxylase signature 794 820 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lele32g0612 996 PRINTS Phosphoenolpyruvate carboxylase signature 311 326 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lele32g0612 996 PRINTS Phosphoenolpyruvate carboxylase signature 251 267 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lele32g0612 996 PRINTS Phosphoenolpyruvate carboxylase signature 620 640 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lele32g0612 996 PRINTS Phosphoenolpyruvate carboxylase signature 471 491 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lele32g0612 996 PRINTS Phosphoenolpyruvate carboxylase signature 662 691 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lele32g0612 996 Pfam Phosphoenolpyruvate carboxylase 67 996 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lele32g0612 996 Gene3D Phosphoenolpyruvate/pyruvate domain 339 474 - -
Lele32g0612 996 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 36 996 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lele32g0612 996 Hamap Phosphoenolpyruvate carboxylase [ppc]. 53 996 IPR022805 GO:0006099|GO:0008964|GO:0015977
Lele32g0612 996 ProSitePatterns Phosphoenolpyruvate carboxylase active site 1. 199 210 IPR018129 -
Lele32g0612 996 FunFam Phosphoenolpyruvate carboxylase 1 339 474 - -
Lele32g0612 996 ProSitePatterns Phosphoenolpyruvate carboxylase active site 2. 622 634 IPR033129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0612 Lele-ChrLele32 3772810 3778581 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele11g0793 11 8026206 8030030 Lele32g0612 32 3772810 3778581 CCT
Lele12g0549 12 13824618 13826948 Lele32g0612 32 3772810 3778581 CCT
Lele29g0628 29 3823378 3837244 Lele32g0612 32 3772810 3778581 hybridization
Lele30g0770 30 12084090 12089488 Lele32g0612 32 3772810 3778581 hybridization