Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0610 ATGCGTCGTCCGATCAAGAAAACCAACTTTTTCAGAGGCCAGGGCGTCGAAGTCTCCGTCAAGGAAGACGGATTTTATGGATCCTACTTCGAAGCCAAGTTCGTTTCTCAACTCGACAATGGCCTCTACGTTGTCAAGTACGACACCTTGCTCGAAGATGACGAGACTCAATTTCTGACGGAAACTCTGTATCCAAAGGAGCTTCGTCCTCGGCCTCCGGCCATCCCTGTTCAACGGTTTTCTGTTAACCAGAAGGTCGATGCCTTCGACAACGACGGTTGGTGGATCGGCGTTATCACCGGAAAATATGGGCCTGACAGTTATTTTGTGTATTTCTCCTACACGAACCAGGAGATCGCTTACCCTTCCTCTCAGCTTAGGGTTCATCAGGATTGGATCAACGGCAAGTGGGTTTTGCCCAAGAAATTTCGCTCTTAG 438 0.4909 MRRPIKKTNFFRGQGVEVSVKEDGFYGSYFEAKFVSQLDNGLYVVKYDTLLEDDETQFLTETLYPKELRPRPPAIPVQRFSVNQKVDAFDNDGWWIGVITGKYGPDSYFVYFSYTNQEIAYPSSQLRVHQDWINGKWVLPKKFRS 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0610 145 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 10 142 - -
Lele32g0610 145 SMART agenet_At_2 78 134 IPR014002 -
Lele32g0610 145 SMART agenet_At_2 8 76 IPR014002 -
Lele32g0610 145 Pfam Agenet domain 13 73 IPR008395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0610 Lele-ChrLele32 3766505 3766942 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0610 22 132 PHD Transcription Factor Family AT5G58610 27.273 2.52e-09 52.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0625 29 3815191 3815631 Lele32g0610 32 3766505 3766942 hybridization
Lele30g0772 30 12094916 12095422 Lele32g0610 32 3766505 3766942 hybridization