Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0605 ATGTCGCAGGCTGGGAAGTCGATGCAGGGACTGGCGCTCGATTCTCTCACTACTCGATCCCGCGTTTTGTTGGGTTCTGACGGAAACAAGCCTGATTTTAAAGAACTCGATCTGGGTTCTCCTGTTTCTCCACTGAAAAACCCTGCCACGGTTAATGCTGCCGGCGCCGTCGCTTCTAACAAGACTTCAAGCTGCAGCTCGAGCTCCTCTGCCGGATCGGTTTCAGGTACCAGAACTACCGTCGCCAAGTTGCCCAGTAAAGCAGAGGGGAAGCTCAGCAACAACGCTGGCGAGCTCCGTGAGACCAACTCAAACGCCTCCGAGAGCCTTCAATCGGCTTCGGCATCCCGACGCACAAAGCCGGGTCATAGGAGATCGGTTTCAGCTGGAGCCCCGTTAATATACTCCAGTGGAAGTTCTAGCAGCTCGGGGAATAACGGTCATTCAAATGGTGCAACTTCAGGGACTAATTTGCTCCCAACCGGCAATATTTGTCCGACAGGGAAGATCTCAAAAACTGGTTTGGCGCCTCGAACGCCCAATAGAACTGATGTTTTGGGTTCAGGGACGGTAAACTATGGCCGAGGCAACATAATGCGTGGTGGCGGGAAATTGGGCAATGGAGCGCACGTCATCATAGACGACAATGTCGCCGGAAATTCTCAGCTCGGAGGGGTTCCGGGCATCGTGAAGCGGGCAATGAATGGTTCTGATCCTGAGGAGGTGAAAAGATCTGGAAATGAACTGTACAGAAGCGGTCACTTTGTGGAGGCATTGTCGTTGTACGACCGCGCAATCTCCATATCACCTAATAATCCTGCTTACCGGAGTAATCGGGCGGCGGCATTGACGGCGCTGGGGATGTTGGCCGTGGCGGCGAAGGAGTGCGAGGAGGCTGTGAAATTGGACCCTGGTTATGCCAGGGCTCATCAGAGACTGGCTTCACTTTATCTGCGGTTTGGGCAGGTTGAGAATGCCCAGAGCCATCTCTGTCTCTCTGGAAAACAGGTGGATCAATCTGAACTGCACAAGTTGAGGCTATTGGAGAAGCATTTGAAACGATGTGCAGAAGCTCGAAAGATTGGGGATTGGAAGAGCGCAGTTAGGGAATCAGACGCAGCCATTGCTGTTGGAGCAGATTTCTCTCCCCAGCTTGTTGCTTGTAAAGCTGAAGCCTATTTCAAACTTCATCTACTTGACGACGCTGAGTCTACCCTCTCAAACATTCCCAAGCTTGAGTGTTGCTCTCAAACCAAGTTCTTTGGTATGGTTGGTGAAGCATATGTTCCCTTGGTTCGAGCTCAGGTTGAGATGGCCTTAGGAAGGTTTGAGAATGCAGTAGCAGAAGCAGAGAAGGCTAGTTTGATAGATTATAGCAACATGGAAGTTGCAAGGGTAGTAAATACAGTGAAAACGGTGGCGAGGGCTCGCTCTCAAGGCAACGATCTTTTTGGCCGCGGAAGATTTTCTGAAGCTTGCTCTGCTTATGGAGAAGGCCTCAAATATGATAGTTCCAACTATGTCTTGTTTTGCAATAGAGCTGTTTGCTGGTCTAAACTTGGACTGTGGGAAAAGTCTGTTGAGGACTGCAACCATGCTCTGAGAATACAGCCAAACTGTACCAAGGCCCTTCTCCGTAGAGCTGTCTCAAATTCTAAGCTTGAAAGGTGGGGAGATGCTATAAGAGATTATGAAGCATTAAAGAGTGAACTTCCTAGAGACAGTGAAGTTGCAGAGTCTCTTCGTCAGGCTCAGCTTGCATTGAGGAAATCTCGTGGGGAAGATAATGGTTCAAAACATGTTGAGGTTGAAGAAGTCTCTACATTAGATAGATTCAAAGCCTCAATTGCTTCTTCTGGTATCTTAGTGGTTCATTTCAAGAAGGCATATAATGAACAATGTAAAGAAATATCACCTTTCATAAACACGCTCTGCACTCGATACCCACATGTTAAATTCATCCAGGTGGATGTGGAAGAGTGTGCAAGTGTAGCAAAAGCTGAGAGCATAAGAGCTGTGCCAAGCTTCAGAATATATGCAAATGGAGAGAAGGTGATGGAGATGATCAGGCCAAGCCAGCAGTTGTTGGAGGACTCTGTGAGGAACTGTTGTAATCTCTAG 2121 0.487 MSQAGKSMQGLALDSLTTRSRVLLGSDGNKPDFKELDLGSPVSPLKNPATVNAAGAVASNKTSSCSSSSSAGSVSGTRTTVAKLPSKAEGKLSNNAGELRETNSNASESLQSASASRRTKPGHRRSVSAGAPLIYSSGSSSSSGNNGHSNGATSGTNLLPTGNICPTGKISKTGLAPRTPNRTDVLGSGTVNYGRGNIMRGGGKLGNGAHVIIDDNVAGNSQLGGVPGIVKRAMNGSDPEEVKRSGNELYRSGHFVEALSLYDRAISISPNNPAYRSNRAAALTALGMLAVAAKECEEAVKLDPGYARAHQRLASLYLRFGQVENAQSHLCLSGKQVDQSELHKLRLLEKHLKRCAEARKIGDWKSAVRESDAAIAVGADFSPQLVACKAEAYFKLHLLDDAESTLSNIPKLECCSQTKFFGMVGEAYVPLVRAQVEMALGRFENAVAEAEKASLIDYSNMEVARVVNTVKTVARARSQGNDLFGRGRFSEACSAYGEGLKYDSSNYVLFCNRAVCWSKLGLWEKSVEDCNHALRIQPNCTKALLRRAVSNSKLERWGDAIRDYEALKSELPRDSEVAESLRQAQLALRKSRGEDNGSKHVEVEEVSTLDRFKASIASSGILVVHFKKAYNEQCKEISPFINTLCTRYPHVKFIQVDVEECASVAKAESIRAVPSFRIYANGEKVMEMIRPSQQLLEDSVRNCCNL 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0605 706 MobiDBLite consensus disorder prediction 53 82 - -
Lele32g0605 706 Pfam TPR repeat 246 287 - -
Lele32g0605 706 Gene3D Glutaredoxin 592 703 - -
Lele32g0605 706 ProSiteProfiles TPR repeat profile. 239 272 IPR019734 GO:0005515
Lele32g0605 706 MobiDBLite consensus disorder prediction 132 188 - -
Lele32g0605 706 SUPERFAMILY TPR-like 385 566 IPR011990 GO:0005515
Lele32g0605 706 SMART tpr_5 473 506 IPR019734 GO:0005515
Lele32g0605 706 SMART tpr_5 507 540 IPR019734 GO:0005515
Lele32g0605 706 SMART tpr_5 273 306 IPR019734 GO:0005515
Lele32g0605 706 SMART tpr_5 541 574 IPR019734 GO:0005515
Lele32g0605 706 SMART tpr_5 427 460 IPR019734 GO:0005515
Lele32g0605 706 SMART tpr_5 239 272 IPR019734 GO:0005515
Lele32g0605 706 Coils Coil 433 453 - -
Lele32g0605 706 MobiDBLite consensus disorder prediction 96 117 - -
Lele32g0605 706 Gene3D Tetratricopeptide repeat domain 237 591 IPR011990 GO:0005515
Lele32g0605 706 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 27 701 IPR044534 -
Lele32g0605 706 SUPERFAMILY Thioredoxin-like 512 693 IPR036249 -
Lele32g0605 706 FunFam TPR repeat-containing thioredoxin TTL4 599 704 - -
Lele32g0605 706 Pfam Thioredoxin 608 692 IPR013766 -
Lele32g0605 706 CDD TRX_family 612 697 - -
Lele32g0605 706 SUPERFAMILY TPR-like 240 330 IPR011990 GO:0005515
Lele32g0605 706 MobiDBLite consensus disorder prediction 22 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0605 Lele-ChrLele32 3744644 3747576 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0605 475 543 U-box Gene Family AT3G07370 34.783 7.98e-06 46.6