Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0604 ATGGAAGCATTTGATTGGAGCTCTGGTGTTCGGGGAAATGCCTCAGAGAGAAGTTCTGATGGTTTTTTGGATAACTCTGGTGTAATGGGAAGAGGGTTTGCTTCATCTTCATCTCTGGTGTTGGACAGAGAGAAGGGAGAGCTTGTGGCTGCTCCGGTCAAAGTGGAAACCAAGAGTGTGTCCACTGAGAGAAGCGTTGAAAGTTTGAAGAACCATAGCGAGGCAGAGAGGAGAAGGAGAGCAAGGATTAATGCACATCTTGACACGCTTAGGAGTGTAGTTCCTGGTGCTAAGAAGATGGACAAAGCATCGTTACTTGGCGAGGTTATCAGACATTTGAAAGAGCTGAAAAGGAATTCTGCACAAGCATGTGAGGGTTTGATGATACCAAAGGACAGTGATGAAATAAGAGTTGAAGAACAAGAAGATGGTTCAAATGGCTTCGCTTATTCGATCAAAGCATCACTATGTTGTGAATATAAACCTGGGTTGTTACCCGAATTAAGACAAGCACTCGATGCTCTTCATCTTAAGATAATGATGGCAGAAATTGCAACCTTGGGAGGCAGAATGAAGAATGTGTTTGTTATAGTTAGCTGTAAAGAACATAACATTAACGAAGATGCTGCATATCGTCAGTTTCTTGCAGTCTCTGTTCACCAAGCTATTAGGTCTGTTCTTGATAGATACTCTTCAGAAGATCTCTTAGGGACCAGAAAGAGAAGGAGACTTTCTATATTCATGGCCCCATTGTTGGAGCTTCTCCTTCTTCTCTGCCACTCACAGAACCCAATGGCTCTGTTGCCATCTCTTCAGAATCTCTCTGTTAACTCTATTGCCAATGGGATTAGCAGAGCCACCTCAATAACCAGAAGACGACCTTCCTTTGTGGTTCAAATGGCGGCGTCCGAGGCATCAATCGGTACTTATGAAGAAGGAAGTCTGGTGAGACCCATTTATACTGGACACACCCCTCTCTCTCGTCTCGTCGCAGCTCTCATTTCCTTCAAGCCCCTTTACTCTATCCTCAAGCTCGGCGCAAGGCAGGTCCTTATAAGCACAGCTGAGAAGAACAACATACCTTGGAGGGAAATGGCGAAAGAGATTTTAGAGTCAGATGTATATAAGGAGCTGGAAAGCATTCAAAACCATTCTCTAGTATACCCTGATTATTACTTGAATCCATTCCATGCTTATGATGAGGGCAATCTTACGTGGCTGGCAGCAGCTGAAGCAGAGGCTGCTACTTTGTCAATGGTGAGACGCGCAATCCCAGACGCTCCTTCGGTAGATGAAGCAAATCAGATACTTCGTGGCAACTGGCTTCAAGCAATTGAACAACATCATCTACAGTATTCAAAAACATCCATGATTAGTGACATTCTAGATATTGGATGCTCTGTCGGTGTAAGCACAAGACATCTTGCAGACAAGTTTCCCAATGCCGAAGTTACCGGGCTAGATTTGTCACCTTATTTTCTTGCTGTAGCTCAACTTAGGGAAAAGAAAAGAGCACTACCACGTAAACATTCCATAAGCTGGATACATGCAAATGGAGAAAACACAGGCTTGCCTTCGAGGTCTTGTGACATCGTTTCCATTGCTTTTGTGCTTCACGAATGTCCTGAAAGAGCTATAGTGAATTTAGTAAAGGAAGCATTTCGTCTTCTTCGACCTGGAGGCACCATAGCTTTGACAGATAATTCGCCAAAATCAAAGATTCTTCAGGAACTGTCACCAGTGCTGTTTACATTGATGAAGAGCACAGAACCGTTCCTTGATGAGTATTACTTGACTGATATGGAAGCTACTCTGAGCAAAGCTGGTTTTGTCAACATAAAATCTATTCTTACTGACCCAAGGCACATGACTACAACGGCAACGTTTCCACCTTGA 1896 0.4367 MEAFDWSSGVRGNASERSSDGFLDNSGVMGRGFASSSSLVLDREKGELVAAPVKVETKSVSTERSVESLKNHSEAERRRRARINAHLDTLRSVVPGAKKMDKASLLGEVIRHLKELKRNSAQACEGLMIPKDSDEIRVEEQEDGSNGFAYSIKASLCCEYKPGLLPELRQALDALHLKIMMAEIATLGGRMKNVFVIVSCKEHNINEDAAYRQFLAVSVHQAIRSVLDRYSSEDLLGTRKRRRLSIFMAPLLELLLLLCHSQNPMALLPSLQNLSVNSIANGISRATSITRRRPSFVVQMAASEASIGTYEEGSLVRPIYTGHTPLSRLVAALISFKPLYSILKLGARQVLISTAEKNNIPWREMAKEILESDVYKELESIQNHSLVYPDYYLNPFHAYDEGNLTWLAAAEAEAATLSMVRRAIPDAPSVDEANQILRGNWLQAIEQHHLQYSKTSMISDILDIGCSVGVSTRHLADKFPNAEVTGLDLSPYFLAVAQLREKKRALPRKHSISWIHANGENTGLPSRSCDIVSIAFVLHECPERAIVNLVKEAFRLLRPGGTIALTDNSPKSKILQELSPVLFTLMKSTEPFLDEYYLTDMEATLSKAGFVNIKSILTDPRHMTTTATFPP 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0604 631 Pfam Methyltransferase domain 462 564 IPR013216 GO:0008168
Lele32g0604 631 Gene3D Vaccinia Virus protein VP39 452 627 IPR029063 -
Lele32g0604 631 MobiDBLite consensus disorder prediction 1 28 - -
Lele32g0604 631 CDD AdoMet_MTases 460 566 - -
Lele32g0604 631 PANTHER TRANSCRIPTION FACTOR BHLH30 31 245 IPR045847 GO:0003700|GO:0006355
Lele32g0604 631 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 67 116 IPR011598 GO:0046983
Lele32g0604 631 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 71 119 IPR036638 GO:0046983
Lele32g0604 631 SMART finulus 73 122 IPR011598 GO:0046983
Lele32g0604 631 Gene3D - 62 123 IPR036638 GO:0046983
Lele32g0604 631 Pfam Helix-loop-helix DNA-binding domain 71 116 IPR011598 GO:0046983
Lele32g0604 631 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 433 621 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0604 Lele-ChrLele32 3729955 3735048 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0604 54 245 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 41.117 2.13e-33 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele32g0604 Methyltransf_11 4.9e-19 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0617 29 3771126 3782038 Lele32g0604 32 3729955 3735048 hybridization
Lele30g0779 30 12140829 12142641 Lele32g0604 32 3729955 3735048 hybridization