Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0584 ATGGCGGGAGCTTTTCTTCGTTCTCTCTGGTCCTCTACCCGAAAATCTTTTTCCTCTTCGCCGTCCCTTTTCACCCCATATCATCTATTGCCGCGAACCAACACCGGTTCCCGCGCCTTCTCCGCCGCCCCAGCTACCGCCGCAGCCGAACCCAGCAGCGCCCTCAACCCCAGCCGCCTCCGCAACGTCGCGGTGATTGCTCATGTTGACCATGGCAAGACCACCCTCATGGATCGACTGCTTCGTCAGTGTGGCGCCGACATACCCCACGAGCGCGCCATGGATTCCATCAATCTGGAGCGTGAGCGTGGTATCACGATCGCTTCCAAGGTTACATCGGTTTCATGGAAGGAAAACGAGCTAAATATGGTTGATACGCCTGGACATGCAGATTTTGGTGGTGAAGTTGAACGAGTTGTTGGTATGGTTGAGGGAGCAGTATTGGTTGTAGATGCTGGTGAAGGCCCACTTGCGCAAACAAAATTTGTTCTGGCAAAAGCCTTAAAGTATGGTTTACGACCACTTCTTCTTTTGAACAAAGTAGACCGACCTTCAGAGGAGCAATTAGACTTTCCAGTTCTTTATGCTTCTGATAAAGAAGGATGGGCATCCACCACCTTTACCAAGGATCCTCCTGCTGAGGCAAAAAATATGTCACAACTTCTTGATGCCATTGTAAATCATGTCCCTCCACCACAAGCAAACATTGATGCGCCTTTCCAAATGCTGGTTTCAATGATGGAACGGGATTTCTATCTTGGGCGGATTTTGACTGGACGTATTCATTCTGGGATTGTTCGTGTAGGTGACAAGGTTCATGGTTTATCTAACAAAGATTCTGGAGTAGTGAAGATTGAAGATGGAAAGGTTGTGAAATTAATGAAAAAGAAGGGTACAAGCATGGTTCCGATTGATTGTGCTGGAGCTGGTGATATTATTTCAATGGCTGGGTTGGCGAGTCCAATAATAGGCAACACGATTATGTCTGCATTACCCACAATTGAGCTGGATCCTCCAACAATTTCCATGACTTTTGGTGTAAATGACTCTCCTTTAGCTGGTCGTGATGGTACTCATTTGACTGGAGGAAAAATTGGTGATCGGCTGGTGGCTGAAGCGGAAACAAACATTGCCATAAATGTGCTTCCAGGCATGTCAGAATCATATGAAGTTCAGGGAAGAGGAGAGCTACAATTGGGTATCCTTATTGAGAATATGAGGCGTGAAGGATTTGAGTTGTCTGTCTCTCCACCTAAAGTCATGTATAAAACTGAAAGTGGTGAGAAACTTGAGCCGATTGAAGAAGTTACAATTGAGGCCTTATCTCATAGGCGAGCTGAAGTTAGTGACATGGGTCCCGTCTCAGGAGCTGTTGGGCGGACTAGATTGTCTTTGACTTGTCCATCAAGGGGCCTGGTTGGGTATAGGAGTGTTTTCAGCAGTGACACGCGTGGAACTGGCTTCATGCACCGTGCTTTCCTTAGGTATGAAAATTTTCGAGGTCCTCTTGGCAAAGTCAGGAAAGGAGTATTGGTACGCTTGTCTAATGCTGTACTTACATATCAATGGGTTATGACATACGATGGGATGATTATTGGTGAACACTCACGAGATACAGATCTTGACTCAAGAAGCAATATTCTGTCATTGATTGTCAATCCCGTGAGAGCTAAGGAACTTACAAATATTCGTGCTGCTGGCAGTGATGAAATTATCAAGCTATCTCCTCCTCGCCTTATGACCCTTGAAGAAGCTATAGGATATGTGGCTTCCGATGAGCTTATCGAGGTGACTCCAAAGGCTATACGGTTGAGGAAGAAATATCTGGATGTTAACAAGCGTAAAAGCATGAGTAAAAGGCCAAAGGAATGA 1872 0.461 MAGAFLRSLWSSTRKSFSSSPSLFTPYHLLPRTNTGSRAFSAAPATAAAEPSSALNPSRLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSINLERERGITIASKVTSVSWKENELNMVDTPGHADFGGEVERVVGMVEGAVLVVDAGEGPLAQTKFVLAKALKYGLRPLLLLNKVDRPSEEQLDFPVLYASDKEGWASTTFTKDPPAEAKNMSQLLDAIVNHVPPPQANIDAPFQMLVSMMERDFYLGRILTGRIHSGIVRVGDKVHGLSNKDSGVVKIEDGKVVKLMKKKGTSMVPIDCAGAGDIISMAGLASPIIGNTIMSALPTIELDPPTISMTFGVNDSPLAGRDGTHLTGGKIGDRLVAEAETNIAINVLPGMSESYEVQGRGELQLGILIENMRREGFELSVSPPKVMYKTESGEKLEPIEEVTIEALSHRRAEVSDMGPVSGAVGRTRLSLTCPSRGLVGYRSVFSSDTRGTGFMHRAFLRYENFRGPLGKVRKGVLVRLSNAVLTYQWVMTYDGMIIGEHSRDTDLDSRSNILSLIVNPVRAKELTNIRAAGSDEIIKLSPPRLMTLEEAIGYVASDELIEVTPKAIRLRKKYLDVNKRKSMSKRPKE 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0584 623 Pfam Elongation factor Tu domain 2 254 327 IPR004161 GO:0005525
Lele32g0584 623 Gene3D - 422 505 - -
Lele32g0584 623 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 95 110 IPR031157 -
Lele32g0584 623 CDD BipA_III 339 416 - -
Lele32g0584 623 Gene3D - 58 233 IPR027417 -
Lele32g0584 623 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 56 188 - -
Lele32g0584 623 Gene3D bipa protein 526 615 IPR042116 -
Lele32g0584 623 FunFam GTP-binding protein TypA 340 445 - -
Lele32g0584 623 TIGRFAM small_GTP: small GTP-binding protein domain 61 225 IPR005225 GO:0005525
Lele32g0584 623 Pfam Elongation factor Tu GTP binding domain 59 187 IPR000795 GO:0003924|GO:0005525
Lele32g0584 623 SUPERFAMILY Translation proteins 216 330 IPR009000 -
Lele32g0584 623 Gene3D Elongation Factor G (Translational Gtpase), domain 3 581 607 - -
Lele32g0584 623 Gene3D Translation factors 234 336 - -
Lele32g0584 623 CDD BipA_TypA_C 431 500 IPR035651 -
Lele32g0584 623 Gene3D Elongation Factor G (Translational Gtpase), domain 3 337 421 - -
Lele32g0584 623 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 54 233 IPR027417 -
Lele32g0584 623 Gene3D bipa protein 506 517 IPR042116 -
Lele32g0584 623 SUPERFAMILY EF-G C-terminal domain-like 337 420 IPR035647 -
Lele32g0584 623 PRINTS GTP-binding elongation factor signature 138 149 IPR000795 GO:0003924|GO:0005525
Lele32g0584 623 PRINTS GTP-binding elongation factor signature 102 110 IPR000795 GO:0003924|GO:0005525
Lele32g0584 623 PRINTS GTP-binding elongation factor signature 174 183 IPR000795 GO:0003924|GO:0005525
Lele32g0584 623 PRINTS GTP-binding elongation factor signature 62 75 IPR000795 GO:0003924|GO:0005525
Lele32g0584 623 PRINTS GTP-binding elongation factor signature 122 132 IPR000795 GO:0003924|GO:0005525
Lele32g0584 623 Pfam Elongation factor G C-terminus 438 501 IPR000640 -
Lele32g0584 623 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 58 233 IPR000795 GO:0003924|GO:0005525
Lele32g0584 623 FunFam Elongation factor family protein 234 336 - -
Lele32g0584 623 SUPERFAMILY EF-G C-terminal domain-like 431 516 IPR035647 -
Lele32g0584 623 CDD BipA_TypA_II 240 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0584 Lele-ChrLele32 3625705 3633598 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0584 59 183 Eukaryotic Initiation Factors Gene Family AT3G22980 42.748 9.96e-26 110