Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0581 ATGGACAGTGACGCGATCTTGGCTATAAGTGTGGTGACTGAAAGTTGCAAAGAGGTGTTTAAGGGAATAAAGTCGTTGGTGGATGCTGGGGGTGGCACTGGCACTGTGGCTAAGGCCATTTCGTTGGTGGACGTTGCAGGTGGCACTGGGACTACAGCTAAGGCCATTGTTAAAGCATTCCCAGAAATTGAATGTACTGTGTTTGATCTCCCACATGTTGTTGATGGCCTGAAAGATAGCAGAAATCTCAAGTTTGTGGGAGGAAACAGGTTCGAGGCTGTTCCTCCTTCCGATGCTGTACTGATGAAGGATGACTTGGTAGGAGACAATCACAATGGAACAGTTGAGAATCAACTGTTGATGGATATGGAGATGATGGTTTTATTTACAAGACTCCTTAATGCTCAAACCCATATATGGAACCACACCTTCAGCTTCATAAACTCTATGTCCCTCAAATCTGCAATAGATCTTAATATTCCAGACATCATTAACAAACATGGCAAACCTATGCCTCTGTCCCTTCTCATCTCTTCCCTTCAAATCCACCCTTCTAAATCTCCACACATTCATCGCTTAATGCGACTCCTCACTCATTCTGGCTTCTTCTCTCTCCAGAAGCTTCCAGATACTAATGACGCTTCAGAAGAAGGATATGTCCTAACCGATGCATCGACCCTTCTTATAAAAGACAGCCCTTTAAGTGTCACCCCCTTCTTGCTTGCCATGTTGGATCCAACCTTAACAAAACCTTGGTATCAAGTAGCTAACTGGTTCCAAAACGGCGATCCGACGCCGTTTCACACTGCGCATGGAAAGACATTTTGGGAGTTTGCTGGGATGGTGACGAGTGTGGTGATTGATAAGTGTAAGGGTGTGTTTAAGGGATTAGAGTCATTTGTAGATGTCGGTGGTAGGACAGGGACAGTGGCTAAGGCTATTGCTGAAGCATTTCCATGTACCGTGTTCGATCTCCCACATGTTGTCGATAGTCTCCAAGATAGTGGGAATCTCAGCTGTATAGAAAATCCATCTCAAAACGACAATCACATATCATCATCATCTTCTTCCATGGGATCCCAAAACAACGAGCTTGGAGCAACAAGACTCCTTCATGCTCAAACCCACATATGGAATCACATCTTCAGCTTCATAAACTCAATGACTCTCAAGTCTGCAATTGAGTTGAACATACCAGAAATCATCCACAAGCATGGCAAGCCAATGCCTCTTCCTCTTCTCATCTCTTCCCTTCAAATTCACCCTTCTAAATCTTCGTACATTCATCGCTTAATGCGACTCCTCACCTATTCTGGCTTCTTCTCTCTCCAGAAGCTTCCAGAAGAAGGCTATGTCCTAACAGATGCATCAACCCTTCTTCTCAAGGACCACCCCTTAAGTGCGACACCTATGGTCCTCCTTATTGTCGATCCCTCCATGAAAAATCCTTGGTATGAGTTGACCAATTGGCTTCAAAATGATGATCCGTCGCCGTTTCACACGGCTCATGGGATGAAGATTTGGGACTACGCTAACGTGAACCCTAAGTTTAATCATTATTTCAATGAAGCTACTGCTAGTGATTCGAGCTTGGTCATGAGTGTTGTGCTCGAAAGTTGCAAAGAGGTGTTCAAAGGAATAAAGTCGTTGGTGGACGTCGCAGGTGGCACTGGGACTACAGCTAAGGCCATTGCTAAAGCATTCCCAGAAATTGAATGTACTGTGTTTGATCTCCCACATGTTGTTGATGGCCTGAAAGATAGTAGAAATCTCAAGTTTGTGGGAGGAAACATGTTCGAGGCTGTTCCTCCTTCCGATGCCGTACTGATGAAGTGGATAGTACATGATTGGGAAGATGAGCAGATTCTGAAGATTCTGAAGAATTGCAGGGAGGGAATTGCAGCAAGCAAAGGGGAAGGAGGGAAGAAGTTGATAATAATAGACAGCGTGTTGGAGGATGACGTGGTCGGAGACAAGCAAAACGGAACAGTTGAGAATCAACTGTTGATGGATATGGAGATGATGGTTTTGTATCCTGGAAAAGAGAGGACTGAGAAAGAACTGGCCAACTTATTCCGTTCTGCCGGTTTTACTGATTACAAGATCTATCCTGTTCTGGGTTCGCGATCTCTCATAGAGGTTTATCCATGA 2151 0.4458 MDSDAILAISVVTESCKEVFKGIKSLVDAGGGTGTVAKAISLVDVAGGTGTTAKAIVKAFPEIECTVFDLPHVVDGLKDSRNLKFVGGNRFEAVPPSDAVLMKDDLVGDNHNGTVENQLLMDMEMMVLFTRLLNAQTHIWNHTFSFINSMSLKSAIDLNIPDIINKHGKPMPLSLLISSLQIHPSKSPHIHRLMRLLTHSGFFSLQKLPDTNDASEEGYVLTDASTLLIKDSPLSVTPFLLAMLDPTLTKPWYQVANWFQNGDPTPFHTAHGKTFWEFAGMVTSVVIDKCKGVFKGLESFVDVGGRTGTVAKAIAEAFPCTVFDLPHVVDSLQDSGNLSCIENPSQNDNHISSSSSSMGSQNNELGATRLLHAQTHIWNHIFSFINSMTLKSAIELNIPEIIHKHGKPMPLPLLISSLQIHPSKSSYIHRLMRLLTYSGFFSLQKLPEEGYVLTDASTLLLKDHPLSATPMVLLIVDPSMKNPWYELTNWLQNDDPSPFHTAHGMKIWDYANVNPKFNHYFNEATASDSSLVMSVVLESCKEVFKGIKSLVDVAGGTGTTAKAIAKAFPEIECTVFDLPHVVDGLKDSRNLKFVGGNMFEAVPPSDAVLMKWIVHDWEDEQILKILKNCREGIAASKGEGGKKLIIIDSVLEDDVVGDKQNGTVENQLLMDMEMMVLYPGKERTEKELANLFRSAGFTDYKIYPVLGSRSLIEVYP 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0581 716 Gene3D Vaccinia Virus protein VP39 461 716 IPR029063 -
Lele32g0581 716 Gene3D Vaccinia Virus protein VP39 229 345 IPR029063 -
Lele32g0581 716 PANTHER O-METHYLTRANSFERASE 1 104 IPR016461 GO:0008168
Lele32g0581 716 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 40 128 IPR029063 -
Lele32g0581 716 FunFam O-methyltransferase ZRP4 462 716 - -
Lele32g0581 716 FunFam Coniferyl alcohol 9-O-methyltransferase 360 460 - -
Lele32g0581 716 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 103 IPR016461 GO:0008168
Lele32g0581 716 Gene3D - 358 460 IPR036388 -
Lele32g0581 716 Gene3D - 129 228 IPR036388 -
Lele32g0581 716 SUPERFAMILY "Winged helix" DNA-binding domain 370 465 IPR036390 -
Lele32g0581 716 Gene3D Vaccinia Virus protein VP39 40 107 IPR029063 -
Lele32g0581 716 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 233 339 IPR029063 -
Lele32g0581 716 FunFam Coniferyl alcohol 9-O-methyltransferase 126 228 - -
Lele32g0581 716 Pfam Dimerisation domain 388 436 IPR012967 GO:0046983
Lele32g0581 716 Pfam Dimerisation domain 150 198 IPR012967 GO:0046983
Lele32g0581 716 Pfam O-methyltransferase domain 273 331 IPR001077 GO:0008171
Lele32g0581 716 Pfam O-methyltransferase domain 484 697 IPR001077 GO:0008171
Lele32g0581 716 Pfam O-methyltransferase domain 41 106 IPR001077 GO:0008171
Lele32g0581 716 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 140 278 IPR016461 GO:0008168
Lele32g0581 716 SUPERFAMILY "Winged helix" DNA-binding domain 131 233 IPR036390 -
Lele32g0581 716 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 466 715 IPR029063 -
Lele32g0581 716 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 378 716 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0581 Lele-ChrLele32 3608716 3614485 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0581 388 714 Monolignol Biosynthesis Gene Families AT5G54160 35.693 5.36e-51 180