Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0572 ATGGAAAATGACAAGGTGGGACTGAAAATGACAAGGTGGGAGGAAGAATCCATTGTTGGAATGATGGCCATGGAAGAAGAAAAGGGCAGAGAACAGTGTAAATTGAATATGACTCGTGATTTTGGTCTCTTCAAATCCCTCCCCCACCTTGCTCCAGAAGCTGCACACGAAGAAGCGCTTCTCTCACCCCCCACCATGCTTCTCTTTCTTCTCCTTCTCCTTCTCCTTCTCTCTCCTCCCTTCATTCTTTCTCTAACTCAAGATGGTCTCTTCCTTCACCAGGCCAAGCTTCAACTCTCCGATCCCGACGATGCTCTTTCTAACTGGAACCTCCGTGACGCCATCCCCTGCAACTGGTTTGGCGTCACCTGCGACCCTCACTCCGGCGACGTCACTTCTCTCAACCTCCCCAACGCACAGCTTCAGGGGCCCTTCCCCACCATCCTTTGCCGCCTCCCTTCCCTCACATTCATCTCCTTCTACAACAACTTGATCAACTCTTCTCTTCCCGCTGATATCTCCGACTGTCGCCATCTTCAGTTTCTCAATCTCTCTCAGAACGCCCTCGTGGGTCCCATCCCGGACACTCTAGCGCAAATTTCAAGTCTACGGCATCTTGACCTCTCTTCCAATAACCTCTCCGGCGATATTCCGGTGTCTTTTGGTCAGTTCCAGCGACTCGAATCGCTGGAGCTCGTTATGAATCTGCTGAATGGGACAATACCGAGTTCTCTGGGTAACATTTCTTCCCTCAGAGTTCTTCGACTTGCTTATAACCCCTTTGCTCCGAGTCCTATACCTGTTGAATTTGGTAACCTGAAGAACATTGAGGAACTATGGCTCACTTATTGTAACATCGTTGGTTCGATTCCGGCATCATTGGGTCGTCTCACTCGGCTCTGGAACCTGGACTTGTCCATGAACAGACTCAATGGATCTATTCCGGAATCAATTTTGGGGATCAAGAGCCTCGTTCAACTCGAGCTTTATCAGAACTCACTCTCCGGCAAGCTACCTGTCGGAATGTCAAAGCTGACGAATCTGAGACGCTTCGATGCGTCGACGAACATGTTGACTGGGACGATTCCTGATGAGTTGTGTCGTTTGGAGCTCGAATCTCTTAATTTGAACGATAATCAACTTGTTGGGCCTTTACCGGAGAGCATAGCTCTTTCTCCGAATTTGCAGGAGCTCAAATTGTTTAACAATACGCTTACTGGGAGGTTGCCAAGTGCTCTTGGTAATAACTCGAAACTCAGGGTTCTTGACGTTTCGTACAATCAGTTTTATGGTGAGATACCGGAGACCTTGTGTGAAGGAGGCGAGTTGGTAGCCCTGATTTTGATTTACAATTCATTTTCTGGGAAAATTCCTCAGAGTCTGGGAGAGTGCACGAGCTTAAACAGGGTCCGAATGAGGAATAACAATCTCTCAGGCATAGTTCCTGATTCTCTCTGGGGTCTACCTCACATGTATTTGCTGGAGCTTCTTCATAATTCTCTATCTGGGCAAATTTCCAGCAAAATATCTGGTGCCCGTAATCTGTCTCAGTTGTTAATTTCGAACAACCAATTTTCTGATTCGATACCTGATGAGATTGGGTCGTTGAATAATCTGGTTGAATTTGATGGCAGCCATAATACTTTCTCTGGTCAGATTCCGGCCAGTATAGTCAAGCTGAGCCAGTTGGGAAGGCTTGATCTCAGTGTCAATAAACTTTCCGGAGCAATACCTGGAGAACTTGGTGAATTGGATAAGCTCAATGAGCTTAATTTGGCAAACAACATGCTTGACGGGAACATTCCAAACGAAATAGGGAGCTTGCCTGTGCTCAATTATCTTGATCTTTCGAGCAATAAGTTATGTGGTGAAATTCCACCCCAGTTGGAAAATTTGAAGCTCAATTCGCTGAATTTGTCATACAATCATCTTTCTGGGAACATTCCTTTTCTTTATGACAACGAGAATTACAGAAAGTGTTTCATAGGGAATCAAGGCCTGTGTGGTAATCTCTATGGACTCTGTCCAAACTATGGTGAAAGTAAGAACCGGAGGTATCTGTGGCTTTTCCGATCAATATTTTTACTTGCTGGTATTGTATTTGTTGTTGGGGTTGCATGGTTTTACTTCAAATACCGAAGCTTCAAGAAATTGAGGAAAGGATTTAACATGTCAAAGTGGAGGTCGTTTCACAGGTATGGATTCAGCGAGCTTGAGATTGTTAAATTGCTTAGTGAAGATAACGTGATTGGGAGCGGAGCATCTGGAAAGGTCTACAAAGTAGCGCTTAGCAATGGCGAGATAGTGGCAGTGAAGAAACTCTGGAGGGCAACTAAGAAAGAAGATGGAAGTGTTGGTCCTGAGAAAGATGAATTCGAAGTTGAAGTCGAGACATTGGGAAAGATCAGACACAAGAACATTGTAAGGCTATGGTGCTGCTGCAACACTGGGGATAGCAAGCTTCTAGTCTATGAATATATGCCTAATGGAAGCTTGGCTGACATACTTCACAGTAGCAAGAAAAGCTTGTTGGATTGGCCAACCAGATATGAAATTGCCATTGATGCTGCTGAGGGACTTTCTTATTTGCACCACGATTGTGTCCCACCAATTGTTCACAGGGACGTGAAGTCTAACAACATACTGCTAGATGGAGAGTTCGGAGCAAAAGTTGCAGATTTCGGGGTGGCCAAAATGTTCAGAGGAGTCGGCCAAGGTGGAGAATCCATGTCTGTCATTGCCGGATCTTATGGTTACATTGCACCAGAGTATGCCTATACCCTTCGGGTGAACGAAAAGAGTGATATTTATAGCTTTGGCGTGGTTATTCTTGAACTGGTGACTGGGAAACCCCCCATTGATTCACAGTATGGAGAAGAAGATTTGGTGAAATGGGTTTCCAAAACATTGAACGAGAAAGGAATGGAGCAAGTGATTGATCCATGTCTTGATTCAAAATACAAAGAACAGATCAGCAAGGTACTCAGTATAGGGCTTCTCTGCACAAGTTGTCTTCCCATAACACGACCTTCCATGCGTCGAGTGGTGAAAATGCTTCATGAAGTTTCTGCAGATCCCAAGTCCAGAAGTACTGTGAAGAGGGACGGAAAACTCTCCCCTTATTATCATGAAGAAGCCGGTGATCATGAAAGCACAGTCTAA 3162 0.4526 MENDKVGLKMTRWEEESIVGMMAMEEEKGREQCKLNMTRDFGLFKSLPHLAPEAAHEEALLSPPTMLLFLLLLLLLLSPPFILSLTQDGLFLHQAKLQLSDPDDALSNWNLRDAIPCNWFGVTCDPHSGDVTSLNLPNAQLQGPFPTILCRLPSLTFISFYNNLINSSLPADISDCRHLQFLNLSQNALVGPIPDTLAQISSLRHLDLSSNNLSGDIPVSFGQFQRLESLELVMNLLNGTIPSSLGNISSLRVLRLAYNPFAPSPIPVEFGNLKNIEELWLTYCNIVGSIPASLGRLTRLWNLDLSMNRLNGSIPESILGIKSLVQLELYQNSLSGKLPVGMSKLTNLRRFDASTNMLTGTIPDELCRLELESLNLNDNQLVGPLPESIALSPNLQELKLFNNTLTGRLPSALGNNSKLRVLDVSYNQFYGEIPETLCEGGELVALILIYNSFSGKIPQSLGECTSLNRVRMRNNNLSGIVPDSLWGLPHMYLLELLHNSLSGQISSKISGARNLSQLLISNNQFSDSIPDEIGSLNNLVEFDGSHNTFSGQIPASIVKLSQLGRLDLSVNKLSGAIPGELGELDKLNELNLANNMLDGNIPNEIGSLPVLNYLDLSSNKLCGEIPPQLENLKLNSLNLSYNHLSGNIPFLYDNENYRKCFIGNQGLCGNLYGLCPNYGESKNRRYLWLFRSIFLLAGIVFVVGVAWFYFKYRSFKKLRKGFNMSKWRSFHRYGFSELEIVKLLSEDNVIGSGASGKVYKVALSNGEIVAVKKLWRATKKEDGSVGPEKDEFEVEVETLGKIRHKNIVRLWCCCNTGDSKLLVYEYMPNGSLADILHSSKKSLLDWPTRYEIAIDAAEGLSYLHHDCVPPIVHRDVKSNNILLDGEFGAKVADFGVAKMFRGVGQGGESMSVIAGSYGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGKPPIDSQYGEEDLVKWVSKTLNEKGMEQVIDPCLDSKYKEQISKVLSIGLLCTSCLPITRPSMRRVVKMLHEVSADPKSRSTVKRDGKLSPYYHEEAGDHESTV 1053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0572 1053 FunFam Receptor-like protein kinase HSL1 370 677 - -
Lele32g0572 1053 SUPERFAMILY L domain-like 96 434 - -
Lele32g0572 1053 Gene3D Ribonuclease Inhibitor 84 262 IPR032675 -
Lele32g0572 1053 Gene3D Ribonuclease Inhibitor 371 677 IPR032675 -
Lele32g0572 1053 Gene3D Phosphorylase Kinase; domain 1 726 826 - -
Lele32g0572 1053 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 251 1021 - -
Lele32g0572 1053 Gene3D Transferase(Phosphotransferase) domain 1 827 1041 - -
Lele32g0572 1053 Pfam Leucine rich repeat N-terminal domain 87 125 IPR013210 -
Lele32g0572 1053 Pfam Leucine rich repeat 202 260 IPR001611 GO:0005515
Lele32g0572 1053 SUPERFAMILY Protein kinase-like (PK-like) 743 1020 IPR011009 -
Lele32g0572 1053 Gene3D Ribonuclease Inhibitor 263 370 IPR032675 -
Lele32g0572 1053 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 85 248 - -
Lele32g0572 1053 SMART serkin_6 744 1042 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele32g0572 1053 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 827 1036 - -
Lele32g0572 1053 FunFam Leucine-rich receptor-like protein kinase family protein 266 364 - -
Lele32g0572 1053 SMART LRR_typ_2 608 632 IPR003591 -
Lele32g0572 1053 SMART LRR_typ_2 297 321 IPR003591 -
Lele32g0572 1053 SMART LRR_typ_2 152 176 IPR003591 -
Lele32g0572 1053 SMART LRR_typ_2 345 369 IPR003591 -
Lele32g0572 1053 SMART LRR_typ_2 200 224 IPR003591 -
Lele32g0572 1053 SMART LRR_typ_2 560 584 IPR003591 -
Lele32g0572 1053 SMART LRR_typ_2 417 440 IPR003591 -
Lele32g0572 1053 SUPERFAMILY RNI-like 340 650 - -
Lele32g0572 1053 PRINTS Leucine-rich repeat signature 203 216 - -
Lele32g0572 1053 PRINTS Leucine-rich repeat signature 608 621 - -
Lele32g0572 1053 ProSitePatterns Serine/Threonine protein kinases active-site signature. 871 883 IPR008271 GO:0004672|GO:0006468
Lele32g0572 1053 ProSitePatterns Protein kinases ATP-binding region signature. 750 773 IPR017441 GO:0005524
Lele32g0572 1053 ProSiteProfiles Leucine-rich repeat profile. 202 224 IPR001611 GO:0005515
Lele32g0572 1053 FunFam Receptor-like protein kinase HSL1 728 826 - -
Lele32g0572 1053 Pfam Protein kinase domain 746 1011 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele32g0572 1053 MobiDBLite consensus disorder prediction 1026 1053 - -
Lele32g0572 1053 ProSiteProfiles Protein kinase domain profile. 744 1023 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0572 Lele-ChrLele32 3550147 3556169 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0572 80 1051 Receptor kinase-like Gene Family AT1G28440 60.609 0.0 1184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele32g0572 Pkinase 4.7e-46 CL0016