Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0569 ATGGTGCACGCAGGAGAATGCTGCATAAGGTGTGCCCATGGTTCAATACCTTGCGATAAAGTTGCAGACAAGGCTTGCGGTCTCACCAGGCTTCCGATGGCGGTTCTGAAATGATCCTACTCCCCATTAAACACCCTCCTCTCAAACCATTCATTCATCGATTCCCAAGTTCTAGTCGATTCGCTGCTTGCAAAGATTGAGAAGCTGAAGAGAAAGAGAGCCGAGGAACACGATTCGAACATGGGTGTGGATTATTACAAGATCTTGCAGGTTGACAAAAATGCCAAAGACGACGACTTGAAGAAGGCTTACAGGAAGCTTGCCATGAAATGGCATCCTGATAAGAACCCCAATAACAAGAAAGAAGCTGAAGCTAAATTCAAGCAGATATCTGAAGCGTATGACGTTCTCAGTGATCCTCAAAAGAGAGCCATCTATGATCAATATGGTGAAGAGGGTCTGAAGGGTGGGGTTCCGCCCCCCGATGCTGGAGGAGCTGGAGGGGCTTCTTTCTTTTCAACGGGAGAAGGACCGACGTCGTTTCGGTTCAATCCCAGGAACGCCGACGACATTTTTGCAGAATTTTTTGGGTTTTCGAGCCCATTTGGAGGCGCCGGTGGCTATGGAGGGATGAGGTCGTCGAGGTTCTCTAGTGGGATTTTTGGGGATGATATGTTTGGATCATATGGAGAAGGAAGGGGAGTCCATATGCATCCAGGTGCTCCTCGAAAAGCTCCTCCGATTGAGAACAGATTGCCATGTAGTCTCGAAGACTTGTATCAGGGAACTACTAAGAAGATGAAGATCTCTAGAGAAATTGCTGATGCTAGTGGTAAAACCATGCCTGTAGAGGAGATCCTAACTATCAATATCAAACCTGGTTGGAAGAAGGGTACAAAGATAACCTTCCCAGAGAAGGGAAATGAGCAGCCAAATGTGACCCCCGCTGACCTTGTTTTCATCATCGATGAAAAGCCTCACAGTGTTTTCACTCGCGATGGACATGATCTGGTTGTGACGCAAAAGATTTCTCTCGCAGAGGCCTTGACTGGTTATACGGTGCAGCTGACTACCTTGGATGGAAGAAACCTGACCATACCAATCGACAATGTGATTCATCCAAGCTATGAGGAGGTTGTTCCAAGAGAAGGGATGCCACTCCAAAAGGATCCCACAAAGAAGGGAAACTTAAGGATAAAGTTCAACATTAAGTTCCCAACTCGGCTGACATCAGAGCAGAAGGCAGGAATCAGGAAACTCTTGGGTGCCTAA 1272 0.4709 MVHAGECCIRCAHGSIPCDKVADKACGLTRLPMAVLKXSYSPLNTLLSNHSFIDSQVLVDSLLAKIEKLKRKRAEEHDSNMGVDYYKILQVDKNAKDDDLKKAYRKLAMKWHPDKNPNNKKEAEAKFKQISEAYDVLSDPQKRAIYDQYGEEGLKGGVPPPDAGGAGGASFFSTGEGPTSFRFNPRNADDIFAEFFGFSSPFGGAGGYGGMRSSRFSSGIFGDDMFGSYGEGRGVHMHPGAPRKAPPIENRLPCSLEDLYQGTTKKMKISREIADASGKTMPVEEILTINIKPGWKKGTKITFPEKGNEQPNVTPADLVFIIDEKPHSVFTRDGHDLVVTQKISLAEALTGYTVQLTTLDGRNLTIPIDNVIHPSYEEVVPREGMPLQKDPTKKGNLRIKFNIKFPTRLTSEQKAGIRKLLGA 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0569 423 CDD DnaJ_C 246 409 - -
Lele32g0569 423 ProSiteProfiles dnaJ domain profile. 84 150 IPR001623 -
Lele32g0569 423 Pfam DnaJ domain 84 147 IPR001623 -
Lele32g0569 423 Gene3D - 247 325 - -
Lele32g0569 423 SUPERFAMILY HSP40/DnaJ peptide-binding domain 329 415 IPR008971 GO:0006457|GO:0051082
Lele32g0569 423 SMART dnaj_3 83 142 IPR001623 -
Lele32g0569 423 Coils Coil 59 79 - -
Lele32g0569 423 PRINTS DnaJ domain signature 86 104 IPR001623 -
Lele32g0569 423 PRINTS DnaJ domain signature 104 119 IPR001623 -
Lele32g0569 423 PRINTS DnaJ domain signature 122 142 IPR001623 -
Lele32g0569 423 PRINTS DnaJ domain signature 142 161 IPR001623 -
Lele32g0569 423 Pfam DnaJ C terminal domain 248 406 IPR002939 -
Lele32g0569 423 FunFam DnaJ subfamily B member 13 83 206 - -
Lele32g0569 423 FunFam Dnaj homolog subfamily b member 244 325 - -
Lele32g0569 423 Gene3D - 327 407 - -
Lele32g0569 423 FunFam DnaJ subfamily B member 13 327 407 - -
Lele32g0569 423 SUPERFAMILY Chaperone J-domain 83 153 IPR036869 -
Lele32g0569 423 SUPERFAMILY HSP40/DnaJ peptide-binding domain 242 337 IPR008971 GO:0006457|GO:0051082
Lele32g0569 423 ProSitePatterns Nt-dnaJ domain signature. 127 146 IPR018253 -
Lele32g0569 423 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 81 421 - -
Lele32g0569 423 MobiDBLite consensus disorder prediction 151 178 - -
Lele32g0569 423 Gene3D DnaJ domain 82 206 IPR036869 -
Lele32g0569 423 CDD DnaJ 84 139 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0569 Lele-ChrLele32 3527537 3531420 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0569 85 149 C2H2 Transcription Factor Family AT1G74250 39.130 1.75e-09 57.8