Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0567 ATGCTTGCGGTGTCACCTTTGAGGGGAACCAAAGATGATATTAAAAGCAGCCAAGGAGAGAATATGGTGGGTGGTTTCTCATCGTCAATCGTCGGTGAAGATGACGGTTTTGGAGAATTTTGCGATGAGAATTTATTTGAGAGCATCAATTTTGACGATCTTTTTGTCGGCATCAACGTGGACGATGCCGGAGATGAGTCGTTGCCGGATTTGGAGATGGGCCAGGAAATCCTCTCCGAGTTCTCCATGGAGTCGTCGGAGAACATGAACTCGTCGACCTCGCTTTCAGTGGAAAATAATGATAATAGATCAGCTGATCAACAACAGACAAGTATTATTACAGCTGGGAAGGAGGAGGAGGAGGAGGAGGAGGAAGAAGATTGTAAGAATAAAGTTTCTTCAGCTTGGGATTCAAATTCTGGGTCAAGTCGAGCAGAAAAAGTAGAGATAGTGAACAAACGAGATGAATCTGCGACGTCGACGAAGAAGTTGAAGCCATGGACGAAGGAAGGGGAGCAAAAGGGAAGAAAATCATCATCAGGCCATCTATCAAAAAATTCACAAGGGAAGAGAAAGGTGAAGGTGGATTGGACCCCAGAATTGCACAGACTATTCGTGCAAGCAGTGGAGCAGCTTGGAGTGGACAAAGCAGTTCCTTCCAAAATCTTAGAGATTATGGGAATTACTTGTCTAACTCGCCACAACATCGCCAGCCACCTCCAAAAATATCGATCGCATAGGAAGCATTTGCTGGCGCGTGAAGCAGAAGCAGCGAGGTGGAATAATAAGAGGAGAGAGGCAAGGCCATGGGTGGTGCCCCCCACCGTGGGTTTCCCTCAGATGCATCCTCCGTCAACGACGATGCCCCAATATTTTAGACCCTTGCATGTATGGGGCCATCCCACCATGGACCACTACTCCTTCATGCCCCGCTGGCCTAAACAACATCATCTTCTTCCACATCCGCCGCTGGCAGCCTGGCCGTACCCAACCGCTCCGCCACCTCCAGTAGGCCCTTCATTCTGGCACCCTCACCACCAGCAGGCCGATCCGAAAGTACTAACCCCTGGAATAGGAACATATTGTTTTCCATCACCAACAACAACAGTACCTCTGACCACGGCGGGATTTGGATCACCAGTCCCTGGCATCCCACCACCCCACGGCATGTTCACGGCAGATCCCGACATCGGATCTCCAACCGGACAACCTGCCCGCCCATGGCCCGACTTTGACTTCCACCCGTCGAATGAAAGCATAGATGCAGCTCTTGGAGATGTTTTATCAAAACCATGGCTGCCACTTCCTCTGGGCCTTAAAGCCCCGGCTCTTGATAGTGTGTTGAGTGAATTAGAGAGACAAGGAATCCCCAAGATTCCTCCCTCTTGTGCTCGAGCTTGA 1401 0.4996 MLAVSPLRGTKDDIKSSQGENMVGGFSSSIVGEDDGFGEFCDENLFESINFDDLFVGINVDDAGDESLPDLEMGQEILSEFSMESSENMNSSTSLSVENNDNRSADQQQTSIITAGKEEEEEEEEEDCKNKVSSAWDSNSGSSRAEKVEIVNKRDESATSTKKLKPWTKEGEQKGRKSSSGHLSKNSQGKRKVKVDWTPELHRLFVQAVEQLGVDKAVPSKILEIMGITCLTRHNIASHLQKYRSHRKHLLAREAEAARWNNKRREARPWVVPPTVGFPQMHPPSTTMPQYFRPLHVWGHPTMDHYSFMPRWPKQHHLLPHPPLAAWPYPTAPPPPVGPSFWHPHHQQADPKVLTPGIGTYCFPSPTTTVPLTTAGFGSPVPGIPPPHGMFTADPDIGSPTGQPARPWPDFDFHPSNESIDAALGDVLSKPWLPLPLGLKAPALDSVLSELERQGIPKIPPSCARA 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0567 466 FunFam Two-component response regulator 188 251 - -
Lele32g0567 466 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 463 IPR044825 GO:0003700|GO:0045893
Lele32g0567 466 MobiDBLite consensus disorder prediction 81 114 - -
Lele32g0567 466 MobiDBLite consensus disorder prediction 81 193 - -
Lele32g0567 466 Gene3D - 189 250 - -
Lele32g0567 466 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 192 246 IPR006447 GO:0003677
Lele32g0567 466 MobiDBLite consensus disorder prediction 147 179 - -
Lele32g0567 466 MobiDBLite consensus disorder prediction 1 27 - -
Lele32g0567 466 Pfam Myb-like DNA-binding domain 195 244 IPR001005 -
Lele32g0567 466 SUPERFAMILY Homeodomain-like 190 249 IPR009057 -
Lele32g0567 466 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 189 248 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0567 Lele-ChrLele32 3514391 3517411 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0567 1 315 G2-like Transcription Factor Family AT5G44190 38.602 1.16e-51 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele32g0567 Myb_DNA-binding 2.6e-08 CL0123