Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0561 ATGGCTTCGTTGTTCAAGGATCTATCCAAGCTTTCAGCCTATCGAGATAGAAAATTTCCTGGAACACAAGAGGAATTTGAGCAAGCGCTCTTGAATTCAACAACTGTTTATGTGGGGAATATGTCGTTTTACACAACAGAAGAGCAAGTTTATGAACTTTTTTCTCGAGCTGGAGAAATTAAGAAAATTATCATGGGATTGGACAAAAACTCGAAAACTCCCTGTGGCTTTTGTTTTGTTTTATTCTACTCTCGAGAAGATACTGAAGATGCTGTCAAATACATAAGTGGGACAATACTTGACGATCGTCCTATTCGTGTTGATTTTGACTGGGGATTCCAGGACGGAAGACAATGGGGTCGGGGTCACAGTGGTGGTCAGGTGCGTGATGAATATCGGACTGATTATGATCCTGATATCCTTTTAGATGTTAAGTTTTCATTGAATTGCAATTTCCTTCCCTATAATAAAAGTGATATTGGTCCTAGAGTCAGCTACATGAATGTGTTAGTTCAGAAAGAGCTGGAGGCACAAAGGCAGCTTGTTGATTATGGTGCTGGTTCTTTGGGCTCTTTTCCCCCAGTTTTCCCACCATCCTATGGCAGACATGGTGGTTCTCATCGGTATGGTAGAGATTACCATAGGAAGAGACACAGAGATGAGGATCGCCATGCTTACGAGTCATCAAAAAGATCTTCAGATCATGAATCACGGAGGAACTCTGATCATGACTCTAGACCGGAAAAAAATCCACGATTTCGTGAGAGTGGTGATTCTGATGATGACGAGGAAGATGATCGAAAAAGAAGATCTTAG 816 0.4142 MASLFKDLSKLSAYRDRKFPGTQEEFEQALLNSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGHSGGQVRDEYRTDYDPDILLDVKFSLNCNFLPYNKSDIGPRVSYMNVLVQKELEAQRQLVDYGAGSLGSFPPVFPPSYGRHGGSHRYGRDYHRKRHRDEDRHAYESSKRSSDHESRRNSDHDSRPEKNPRFRESGDSDDDEEDDRKRRS 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0561 271 SUPERFAMILY RNA-binding domain, RBD 26 136 IPR035979 GO:0003676
Lele32g0561 271 MobiDBLite consensus disorder prediction 197 271 - -
Lele32g0561 271 FunFam Nuclear cap-binding protein subunit 2 4 141 - -
Lele32g0561 271 MobiDBLite consensus disorder prediction 215 271 - -
Lele32g0561 271 PANTHER 20 KD NUCLEAR CAP BINDING PROTEIN 2 139 IPR027157 GO:0000339|GO:0005846|GO:0045292
Lele32g0561 271 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 36 106 IPR000504 GO:0003723
Lele32g0561 271 Gene3D - 6 140 IPR012677 -
Lele32g0561 271 CDD RRM_NCBP2 36 113 IPR034148 -
Lele32g0561 271 SMART rrm1_1 35 108 IPR000504 GO:0003723
Lele32g0561 271 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 34 112 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0561 Lele-ChrLele32 3482492 3485910 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0561 23 128 Eukaryotic Initiation Factors Gene Family AT2G36660 27.358 9.06e-07 47.8