Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0557 ATGGCTGTGAAGGAGAAGCTCGGTATCAAGCACACCAAGCCAAACATTGCCAAGGAGGTTCACTACAGGGGCGTCCGCAAGAGACCCTGGGGACGTTACGCCGCCGAAATACGAGATCCCGGCAAGAAGAGCCGAGTTTGGCTTGGCACCTTTGACACGGCGGAGGAAGCTGCAAAAGCCTACGACACCGCCGCTAGGCAATTCCGTGGCCCCAAGGCTAAGACTAACTTTCCTCTGCCCAACGAGAGCGGTCCCAACGGAAATAACAAGAGCCCAAGCGAGATCAGCACCGTGGAGTCATCCAGCCGAGACGGCTCGGAGCGTGAGATAACGCGCCGCTGTGATGTTGGCGTTGTTGTGGATCGGTTCCCGTTTCTCCCGATTCAGCCACACCACATGGCGTTTGGTTGCAGCGGTGGTGGTGGGGTGGCGGGTTTGGTGCCATCAGCTGTGCGTCCAGTTTTCTTTTTTGAACCGGCGGTAGGTGGTAGGGCCGAGTTCGTGGGTCAGCCATATCCGCCGGTCGACGTTACGACCCAAATGAGAAGTGCGCCTTCGAGTGACTCCGATTCGTCCTCCGTCATTGATTGTCAGCCTAAGAAAGCCGTCAATCTTGATCTTAACCTTGCCCCTCCATCAGAAGGCTGA 648 0.5694 MAVKEKLGIKHTKPNIAKEVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAKAYDTAARQFRGPKAKTNFPLPNESGPNGNNKSPSEISTVESSSRDGSEREITRRCDVGVVVDRFPFLPIQPHHMAFGCSGGGGVAGLVPSAVRPVFFFEPAVGGRAEFVGQPYPPVDVTTQMRSAPSSDSDSSSVIDCQPKKAVNLDLNLAPPSEG 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0557 215 PRINTS Ethylene responsive element binding protein signature 44 60 IPR001471 GO:0003700|GO:0006355
Lele32g0557 215 PRINTS Ethylene responsive element binding protein signature 22 33 IPR001471 GO:0003700|GO:0006355
Lele32g0557 215 MobiDBLite consensus disorder prediction 79 100 - -
Lele32g0557 215 Gene3D AP2/ERF domain 20 79 IPR036955 GO:0003700|GO:0006355
Lele32g0557 215 MobiDBLite consensus disorder prediction 176 195 - -
Lele32g0557 215 SUPERFAMILY DNA-binding domain 21 79 IPR016177 GO:0003677
Lele32g0557 215 MobiDBLite consensus disorder prediction 63 109 - -
Lele32g0557 215 CDD AP2 21 78 IPR001471 GO:0003700|GO:0006355
Lele32g0557 215 FunFam Ethylene-responsive transcription factor 2 20 79 - -
Lele32g0557 215 ProSiteProfiles AP2/ERF domain profile. 21 78 IPR001471 GO:0003700|GO:0006355
Lele32g0557 215 SMART rav1_2 21 84 IPR001471 GO:0003700|GO:0006355
Lele32g0557 215 Pfam AP2 domain 21 70 IPR001471 GO:0003700|GO:0006355
Lele32g0557 215 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 17 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0557 Lele-ChrLele32 3467712 3468359 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0557 1 212 AP2-EREBP Transcription Factor Family AT5G44210 47.059 1.25e-48 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele32g0557 AP2 5.9e-15 CL0081