Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0556 ATGCGTTGGGGTAGTTATGCTAGTAGGAGGGAAAGAGGAAAGAGGAAAGAGGGGAAGCGTGGGGAAAAGAGGGAGGAAGCAGGAACAAAAGGCGAAAGCGATCTCCTCCCCACAGATTCCGCCGACGCGGACTCTGGATCTAGAAAAGATTCCCAGCTATTTGGTGAAGAGGACATCTGTACAAGTACAGATGCTCCTAATTCAACAATGAAGCGCTACGTTTACATCAATGATGAGGAATCTGCACGTGATGTCTACTGTGATAATCGCATATCGAACAGAAAATATACTTTACTGAACTTTCTACCGAAAAATTTATGGGAACAGTTCAGCCGATTCATGAATCAGTACTTTTTACTTATAGCTTGCCTACAGCTATGGCCTCTCATTACACCAGTAAATCCTGCCAGTACATGGGGTCCACTTATCTTCATATTTGCAGTCTCTGCGTCAAAAGAGGCTTGGGATGATTACAACAGATATCTTTCAGACAAGAAGGCTAACGAGAAGGAAGTCTGGGTTGTCAGCAAAGGCATTAAGAAACATATCCAAGCACAGGATATCCATGTAGGTACTATAGTATGGTTACGTGAAAATGATGAAGTGCCTTGTGACCTTGTTCTGCTTGGTACCTCTGACCCCCAAGGACTTTGCTATATAGAGACTTCTGCACTGGATGGTGAAACCGACCTGAAGACAAGGATTATACCTTCTGCTTGCATGGGAATAGATGTTGAGCTATTGCACAAAATAAAGGGTGTAATTGAGTGCCCTAATCCAGATAAAGACATCAGAAGATTTGATGCGAATATGAGGTTGTTCCCCCCATTTATTGATAATGATATGTGTCCTTTAACAATAAAAAACACCATTCTTCAGTCATGTTACTTGCGGAATACAGAGTGGGCATGTGGAGTGGCTGTGTATACAGGCAAGTTATTTGATAGCAATGAAACCAAGCTGGGAATGAGTAGGGGTATCCCAGAACCAAAGCTCACTGCAATGGATGCCATGATTGACAAGTTGACTGGTGCTATATTTGTATTCCAAATTGTGGTTGTTATGGTTCTTGGTATAGCTGGTAATGTTTGGAAGGATACAGAGGCAAAGAAAAAATGGTATGTCCTCTACCCAAATGAAGGCCCTTGGTTTGAACTATTGGTCATCCCTCTGCGATTTGAGCTTCTTTGTTCCATCATGATACCTATTTCCATCAAGGTATCTCTAGATCTGGTGAAAAGCTTGTACGCAAAATTTATTGATTGGGACCATCAGATGGTTGACTCAGAAACTAGTATTCCGTCCCATGCAACAAATACATCCATAAGCGAGGACCTGGGACAAGTTGAGTACATACTGACAGACAAGACAGGCACTCTGACTGAGAATAAGATGATTTTTAAAAGATGTTGTATCAGTGGCATTTTCTATGGAAATGAAGATGGGGATGCATTGAAAGATGTTGAGCTTCTTGGTGCTATTGCTAGTGGTTCCCCTGATGTTGTGCGATTTCTTACAATTATGGCAATATGTAATACTGTCATACCTACACGAAGCAAAATTGGAGATATTTTGTATAAGGCACAGTCTCAGGATGAGGATGCTCTTGTCAATGCCGCTGCTAGGTTGCATATGGTTTTCTTCAACAAGAATGGAAATATTCTTGAAGTCAAGTTCAATTCTTCAATGCTTGCTTATGAAATTCTGGATACCCTAGAATTCACCTCTGATAGGAAACGAATGTCAGTGGTGGTAAAAGATTGTCAAAATGGAAAGATACTTCTCCTATCAAAAGGAGCAGATGAGGCAATTCTTCCATTTGCCCTTGTTGGGCAGCAAACCCGCAATTTCATTGAAGCTGTGGAGCAATATGCTCACTTGGGACTACGTACGCTATGCTTGGCTTGGCGAGAGTTAAAGGAAGATGAATATCAACAATGGTCTTTGATGTTTAAGGAGGCTAATAGCACTTTGGTTGATAGGGAGTGGAGAGTTGCTGAAGTCTGCCAAATAATTGAACATGACTGGGAAGTTCTTGGCGTAACAGCTATAGAAGATCGCTTACAGGATGGAGTTCCTGAAACAATAGAAACACTTAGAAAGGCTGGAATAAATTTTTGGATGCTAACTGGAGACAAGCAGAATACTGCTATTCAAATTGCCTTGTCATGCAATTTTATTTCCCCAGAGCCAAAGGGACAGCTTCTATCAATTGATGGCAAAACCAAAGATGAGGTTTGTAGAAGTTTGGAGAGAGTTCTTCTTACAATGAGGATAACTCCCTCAGAACCTAAGGATGTGGCCTTTGTTGTTGATGGTTGGGCTCTTGAGATTGTGCTTAATCACTACCGGAAAGCTTTTACTGAGCTTGCCATACTGTCAAGGACTGCTATATGTTGCCGTGTGACACCATCTCAAAAAGCACAGCTTGTAGAGCTTTTAAAATCATGTGATTATAGAACACTGGCAATTGGTGATGGTGGAAATGATGTAAGGATGATACAAACTGCAGACATAGGTGTTGGCATTAGTGGGAGAGAAGGGTTGCAAGCAGCAAGAGCAGCTGATTACAGTGTTGGAAAGTTCAGGTTCTTAAAGAGATTAATTCTTGTCCATGGCCGGTACTCTTACAACCGTACAGCATTTCTTTCTCAGTACTCATTCTACAAGTCCCTACTGATATGTTTCATCCAAATCTTTTTTTCATTCATTTCAGGGGTCTCTGGAACCAGCCTTTTCAATTCTGTTAGCTTGATGGCTTATAATGTTTTCTACACTAGTGTTCCTGTACTAGTCAGCGTGCTTGACAAAGATCTTGGTGAAGAAACTGTGATGCAGCATCCCCAGATTTTATTTTATTGCCAAGCTGGGAGGCTTCTAAACCCAAGTACATTTGCTGGATGGTTTGGGCGATCTCTCTTTCATGCAATAGTAGTATTTTTGATAACCATACATGCCTGTGCTTCTGAGAGAAGTGAAATGGAGGAGGTCTCGATGGTTGCGCTCTCTGGTTGTATATGGTTGCAGGCTTTTGTGGTCGCAATGGAGACCAATTCCTTCACAATATTGCAACATCTTGCTATATGGGGAAATTTGGCTGCCTTTTATGTCATCAACTTCATCTTCAGTGCCATTCCTTCGTCAGGGATGTATACAATTATGTTTCGGTTGTGCCGACAACCATCATATTGGATAACAATATTTCTTACAGCAGCAGCTGGGATGGGTCCAATTCTTGCCATCAAGTACTTCAGATTTACGTATAGACCAAGCAAAATAAATACCCTTCAGCAAGCTGAACGTCTGGGTGGACCAATTTTGTCTCTGGGCACAATTGAGCCTCAATCCAGATCCATAGAGAAAGAAGTCTCTTCACTGTCAATAACACAGCCCAAGAACAGAAGTTCTGTGTATGAACCTCTCTTGTCAGATTCTCCAAATGCCACCAGAAGGTCTCTTGGAGCAGCAACACCATTTGATTTTTTCCAATCTGCGTCGCGATTATCGCTATCTAGTAGTTACACAAGAAATTGCAAGGACAACTGA 3546 0.4165 MRWGSYASRRERGKRKEGKRGEKREEAGTKGESDLLPTDSADADSGSRKDSQLFGEEDICTSTDAPNSTMKRYVYINDEESARDVYCDNRISNRKYTLLNFLPKNLWEQFSRFMNQYFLLIACLQLWPLITPVNPASTWGPLIFIFAVSASKEAWDDYNRYLSDKKANEKEVWVVSKGIKKHIQAQDIHVGTIVWLRENDEVPCDLVLLGTSDPQGLCYIETSALDGETDLKTRIIPSACMGIDVELLHKIKGVIECPNPDKDIRRFDANMRLFPPFIDNDMCPLTIKNTILQSCYLRNTEWACGVAVYTGKLFDSNETKLGMSRGIPEPKLTAMDAMIDKLTGAIFVFQIVVVMVLGIAGNVWKDTEAKKKWYVLYPNEGPWFELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDHQMVDSETSIPSHATNTSISEDLGQVEYILTDKTGTLTENKMIFKRCCISGIFYGNEDGDALKDVELLGAIASGSPDVVRFLTIMAICNTVIPTRSKIGDILYKAQSQDEDALVNAAARLHMVFFNKNGNILEVKFNSSMLAYEILDTLEFTSDRKRMSVVVKDCQNGKILLLSKGADEAILPFALVGQQTRNFIEAVEQYAHLGLRTLCLAWRELKEDEYQQWSLMFKEANSTLVDREWRVAEVCQIIEHDWEVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTKDEVCRSLERVLLTMRITPSEPKDVAFVVDGWALEIVLNHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQTADIGVGISGREGLQAARAADYSVGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGVSGTSLFNSVSLMAYNVFYTSVPVLVSVLDKDLGEETVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVVFLITIHACASERSEMEEVSMVALSGCIWLQAFVVAMETNSFTILQHLAIWGNLAAFYVINFIFSAIPSSGMYTIMFRLCRQPSYWITIFLTAAAGMGPILAIKYFRFTYRPSKINTLQQAERLGGPILSLGTIEPQSRSIEKEVSSLSITQPKNRSSVYEPLLSDSPNATRRSLGAATPFDFFQSASRLSLSSSYTRNCKDN 1181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0556 1181 SFLD Haloacid Dehalogenase 436 875 - -
Lele32g0556 1181 ProSitePatterns E1-E2 ATPases phosphorylation site. 455 461 IPR018303 -
Lele32g0556 1181 Gene3D - 524 659 IPR023299 GO:0000166
Lele32g0556 1181 MobiDBLite consensus disorder prediction 1 62 - -
Lele32g0556 1181 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 501 1097 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Lele32g0556 1181 FunFam Phospholipid-transporting ATPase 523 666 - -
Lele32g0556 1181 FunFam Phospholipid-transporting ATPase 144 325 - -
Lele32g0556 1181 PRINTS P-type cation-transporting ATPase superfamily signature 702 712 - -
Lele32g0556 1181 PRINTS P-type cation-transporting ATPase superfamily signature 824 843 - -
Lele32g0556 1181 PRINTS P-type cation-transporting ATPase superfamily signature 221 235 - -
Lele32g0556 1181 PRINTS P-type cation-transporting ATPase superfamily signature 453 467 - -
Lele32g0556 1181 SUPERFAMILY HAD-like 448 879 IPR036412 -
Lele32g0556 1181 Pfam Phospholipid-translocating P-type ATPase C-terminal 852 1091 IPR032630 -
Lele32g0556 1181 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 790 908 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele32g0556 1181 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 671 736 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele32g0556 1181 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 460 643 IPR023299 GO:0000166
Lele32g0556 1181 MobiDBLite consensus disorder prediction 18 32 - -
Lele32g0556 1181 Pfam haloacid dehalogenase-like hydrolase 451 773 - -
Lele32g0556 1181 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 51 1101 - -
Lele32g0556 1181 Gene3D - 676 863 IPR023214 -
Lele32g0556 1181 SUPERFAMILY Calcium ATPase, transmembrane domain M 81 1090 IPR023298 -
Lele32g0556 1181 FunFam Phospholipid-transporting ATPase 676 863 - -
Lele32g0556 1181 Pfam Phospholipid-translocating ATPase N-terminal 74 139 IPR032631 -
Lele32g0556 1181 Gene3D - 148 319 - -
Lele32g0556 1181 SFLD p-type atpase 436 875 IPR044492 -
Lele32g0556 1181 SUPERFAMILY Calcium ATPase, transduction domain A 169 311 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0556 Lele-ChrLele32 3449303 3463672 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0556 70 1181 Primary Pumps ATPases AT5G44240 84.532 0.0 1979