Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0554 ATGCACGGCAGAGAAATCCTTCAGAAAATGAAGGTGAAAGCATTTGGAACATCAGGAGGTGACAGAGGGAAAGGGAAAAGCAAAATGTCAAAGAACAAAACACATGGATTTCACTTGGTGAAGGGGAAATCAGCTCATGCTATGGAAGATTATGTAGTTTCAAAATTCAAGCAAGACAAGGACAAGGAATTAGGTTTATTTGCAATATTTGATGGTCATTTAGGCCATGATGTTGCAAGCTATTTGCAGAACAACCTTTTCGACAACATCTTAAAACAGGAAGACTTCTGGACTGATGCAGAAAGTGCAGTGAAGAGAGCTTACCTTATAACAGACGACAAAATATTAGAACAATCATTTGAGTTGGGACGAGGAGGATCAACCGCTGTAACAGCAATACTGATAAATGGTCAGAAACTTGTAGTAGCAAACGTTGGAGACTCTCGAGCTGTTATCAGCAAGAATGGTAAGTCCAAGCAACTTTCCATTGATCACGAGCCAAGCAAGGAGAAAAAGATGATTGAGAGCCGTGGTGGTTTTGTCTCAAACATTCCAGGAGATGTGCCTCGCGTAGATGGAAAGCTGGCGGTAGCGAGGGCTTTTGGTGATAAGAGTTTAAAGATGCATCTTAGTTCTGAACCTGATGTTGTTGTACAGAATGTTGAAGAAGGCACAGAGTTCCTTATTTTGGCAAGTGATGGAATCTGGAAGGTGATGTCAAACCAAGAAGCAGTGGATTGTATCAGGAAGACAAAGGATCATGCACAGGCTGCAGCGAAGCGGTTGATAGAAGAAGCCGTTGCAAGGAACAGTAAGGATGACATATCCTGTATCATTGTCAAGTTCCAATGA 852 0.419 MHGREILQKMKVKAFGTSGGDRGKGKSKMSKNKTHGFHLVKGKSAHAMEDYVVSKFKQDKDKELGLFAIFDGHLGHDVASYLQNNLFDNILKQEDFWTDAESAVKRAYLITDDKILEQSFELGRGGSTAVTAILINGQKLVVANVGDSRAVISKNGKSKQLSIDHEPSKEKKMIESRGGFVSNIPGDVPRVDGKLAVARAFGDKSLKMHLSSEPDVVVQNVEEGTEFLILASDGIWKVMSNQEAVDCIRKTKDHAQAAAKRLIEEAVARNSKDDISCIIVKFQ 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0554 283 Gene3D - 20 283 IPR036457 -
Lele32g0554 283 CDD PP2Cc 35 282 IPR001932 -
Lele32g0554 283 PANTHER PROTEIN PHOSPHATASE 27 282 - -
Lele32g0554 283 SUPERFAMILY PP2C-like 32 282 IPR036457 -
Lele32g0554 283 Pfam Protein phosphatase 2C 46 275 IPR001932 -
Lele32g0554 283 SMART PP2C_4 26 280 IPR001932 -
Lele32g0554 283 ProSiteProfiles PPM-type phosphatase domain profile. 34 282 IPR001932 -
Lele32g0554 283 SMART PP2C_SIG_2 39 282 IPR001932 -
Lele32g0554 283 FunFam Probable protein phosphatase 2C 39 24 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0554 Lele-ChrLele32 3436470 3438291 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0554 23 283 PP2C-type Phosphatase Gene Family AT4G28400 75.096 9.15e-145 405