Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0547 ATGACTGTTACGTTGCTGCTTTGCTTTTCATCATCATCCCAAGCTTTGAAATTCAACATTGGTGTCAAAGATGGCTGGGTTGTGAAGCCTTCTGAAGATTATTACAATCACTGGGCTGAAAGGAATAGGTTTCAAGTCAATGATACGCTATTTCTAGTGGTGAACAAGACGGATTACGATTCCTGCAACACCAAGAATCCCATGAAGAAGATGAACGACGGTGATTCTTACTTCACCTTCGATAAATCGGGTCCTTTCTTCTTTATCGGTGGCAATTCTGGAAAGTGCAAAAAGGGCCAGAAGCTTATCTTCGTCGTCTTGGCTGTCCGGCACAAGATTCCTACTGGCTCACCTCCGACGACGGCTGCTCCGGCTCCGTCTCCAGCAGGTGAGAGTTTTCCACCCGCCATGTCGCCGGGGAGTTTGTCACCTCGGCCAAGTGAGGGACCAAATGCTGGTGACAACTCTCCGGCGCCGTCGCCGTCGCTTCCTTCGGGTTCTACGAGGTTTGGGGGTTCTGTGAGCGTGGTGGGGATGGGGGTGTTATTATGGGTTGCTTCTTCTTTGGACTTGTTTGAGATGTTGGTTTATCCCTTGATCCGGGCGTCTCAACTCTATATCATCTACGATTCGCTGGGAGGTGCACTACCTGCATCTCTACGAGAACGGCGCGTTTCGCTATGTGGAATATCGGCCATTGATACCGTTAAATCACGGACTTCAACTTTTCACATTCTCCTTCGACATCTGAAACACAACAGCTTCGTGCTCCGCCGTCTTCCGCTGCTTGTCATCGATTCGGAACTCAGCCCTGCTCACCGCCGTGCCCTTATTTCATGCTTTCCTTTTTATTTCATGTGGCTGGAAGATCGTGTGGAGACCGTGAAAGTGTTGGATAAAATGCCTGGGAGAACACCCTCTGTAACATATGCTGACAGCTTTGCCGCATTAAGGATGATGAAGACTTTGTTCCTTCCTTACCAAGTATTAAATTTTTCATCTAAAAAACTTGATAAAAAATTTGAAGTGCGTAAGCACCTAAGATCTAAAGGACCAAAGATGGAGCTTACTATTACACAACCTGATGATTGGCATCTCCACCTTCGTGATGGTGACCTTCTCAAAGCTGTCGTCTGTTCCAGTGCAAAGCATTTTGGAAGGGCGATAGTTATGCCAAATTTGAAGCCACCTATTACCACCGCGGCTGCTGCTTTGGCTTACCGAGAGTCCATCTTAAAAGCACTGCCTAGAGATAGTAACTTCACTCCTCTAATGACCCTTTACCTAACAGACAACACAAGCCCTGATGAGATTAAACTTGCAAAAAGAAGTGGAGTTATTTATGGTGTGAAGCTTTATCCTGCTGGTGCCACAACAAACTCCCAAGATGGTGTTACTGATCTTTTTGGAAAATGTTTTCCTGTCCTAGAGGAGATGGTTCGGCAGAATATACCATTATTGGTTCATGGGGAAGTTACAGATCCAAGTGTTGATATTTTTGATAGGGAAAAGGTCTTTATTGAAACAATTTTAGAGCCTTTACTTCAAAGGCTTCCTCAGCTGAAGGTTGTAATGGAACATATTACTACCATGGATGCAGCTAAATTTGTAGAATCTTGCAAAGAAGGTTATGTAGCTGCAACTGTTACACCACAGCATCTTATTCTGAACCGCAATGCTCTGTTCCAAGGTGGTTTGCAGCCCCACAATTACTGTCTTCCAGTGCTCAAAAGAGAAATCCACAGACAGGCTATTGTTTCTGCTGTTACTAGGGGAAGTAAAAGGTTTTTCCTTGGAACAGATAGCGCTCCTCATGAAAGACATAAAAAAGAATGCACTTGCGGATGTGCTGGCATATACAACTCCCCTGTCGCTCTATCACTTTATGCCAAGATCTTTGAAGAGGCTGGTGCACTTGACAAGCTGGAGGCCTTCACAAGCTTTAATGGACCAGACTTCTATGGCCTTCCAAGAAACAACTCAAAGATTAAACTGAGGAAGGCTCAATGGAAGGTGCCTGAGACTTTTCCCTTTCCGTTCGGAGAAATTGTGCCCATGTTCGCTGGTGAAACGCTTGAATGGGAGGCAATCCTTGTTTGA 2100 0.4543 MTVTLLLCFSSSSQALKFNIGVKDGWVVKPSEDYYNHWAERNRFQVNDTLFLVVNKTDYDSCNTKNPMKKMNDGDSYFTFDKSGPFFFIGGNSGKCKKGQKLIFVVLAVRHKIPTGSPPTTAAPAPSPAGESFPPAMSPGSLSPRPSEGPNAGDNSPAPSPSLPSGSTRFGGSVSVVGMGVLLWVASSLDLFEMLVYPLIRASQLYIIYDSLGGALPASLRERRVSLCGISAIDTVKSRTSTFHILLRHLKHNSFVLRRLPLLVIDSELSPAHRRALISCFPFYFMWLEDRVETVKVLDKMPGRTPSVTYADSFAALRMMKTLFLPYQVLNFSSKKLDKKFEVRKHLRSKGPKMELTITQPDDWHLHLRDGDLLKAVVCSSAKHFGRAIVMPNLKPPITTAAAALAYRESILKALPRDSNFTPLMTLYLTDNTSPDEIKLAKRSGVIYGVKLYPAGATTNSQDGVTDLFGKCFPVLEEMVRQNIPLLVHGEVTDPSVDIFDREKVFIETILEPLLQRLPQLKVVMEHITTMDAAKFVESCKEGYVAATVTPQHLILNRNALFQGGLQPHNYCLPVLKREIHRQAIVSAVTRGSKRFFLGTDSAPHERHKKECTCGCAGIYNSPVALSLYAKIFEEAGALDKLEAFTSFNGPDFYGLPRNNSKIKLRKAQWKVPETFPFPFGEIVPMFAGETLEWEAILV 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0547 699 ProSiteProfiles Phytocyanin domain profile. 16 108 IPR003245 GO:0009055
Lele32g0547 699 Hamap Dihydroorotase [pyrC]. 354 697 IPR004721 GO:0004151|GO:0019856
Lele32g0547 699 ProSitePatterns Dihydroorotase signature 1. 363 371 IPR002195 GO:0016812
Lele32g0547 699 MobiDBLite consensus disorder prediction 116 166 - -
Lele32g0547 699 Pfam Amidohydrolase family 363 665 IPR006680 GO:0016787
Lele32g0547 699 Gene3D - 14 110 IPR008972 -
Lele32g0547 699 ProSitePatterns Dihydroorotase signature 2. 599 610 IPR002195 GO:0016812
Lele32g0547 699 Gene3D - 354 697 - -
Lele32g0547 699 SUPERFAMILY Cupredoxins 15 107 IPR008972 -
Lele32g0547 699 TIGRFAM pyrC_dimer: dihydroorotase, homodimeric type 355 695 IPR004721 GO:0004151|GO:0019856
Lele32g0547 699 PANTHER DIHYDROOROTASE 326 695 IPR004721 GO:0004151|GO:0019856
Lele32g0547 699 MobiDBLite consensus disorder prediction 144 166 - -
Lele32g0547 699 MobiDBLite consensus disorder prediction 119 133 - -
Lele32g0547 699 FunFam Dihydroorotase 353 697 - -
Lele32g0547 699 CDD DHOase 356 694 IPR004721 GO:0004151|GO:0019856
Lele32g0547 699 Pfam Plastocyanin-like domain 31 100 IPR003245 GO:0009055
Lele32g0547 699 CDD OsENODL1_like 17 107 IPR041846 -
Lele32g0547 699 SUPERFAMILY Metallo-dependent hydrolases 355 695 IPR032466 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0547 Lele-ChrLele32 3388819 3396166 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0547 1 189 Phytocyanin Superfamily AT4G28365 41.791 1.66e-34 128
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0567 29 3436409 3437061 Lele32g0547 32 3388819 3396166 hybridization
Lele30g0840 30 12499094 12499837 Lele32g0547 32 3388819 3396166 hybridization